Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01345 ATGGCGGTCGTgagaattttctctctctacatttccatgtctttcttcttcttcatcttctacaCTAAAGTCATTGCCTTGAACGAGTCTACGTCTTCATCTCCTTCCTATGATGCTGAACTTCTCTTGGGACAAATCAGAGCTTCACTACAAGGTAACGCTGAGAACCTTGTGTTGTCTTCATGGAACTACTCTGTACCACTCTGTCAATGGAGGGGGCTCAAATGGGTCTACTCCAATGGCTCTCCTCTCTCTTGTGACTTGTCTTCACCCCAATGGACCAATCTTTCACTGTTTAAAGACCCTTCTTTGCATTTGTTCTCTCTTCAGCTCCCTTCTGCTAATCTCTCTGGTTCACTCCCTAGAGAGCTTGGAGAGTTCCCTATGCTCCAAAGCTTCTACCTTAACATCAATTCCCTGAAAGGGACAATCCCTCTAGAGCTTGGCTACAGTTCTTCTCTCTCTGACATCGATTTAGGTGACAATCTGCTCACTGGAACCTTGCCCCCTTCAATCTGGAATCTCTGTGATAAACTCATTTCCCTTAGACTCAATGGTAATTTACTCTCTGGGCCTCTTCCTGAGCCAGCATTGCCAAACTCTAATTGTAAGAATTTGCAATTTCTTGATTTGGGTGAAAACAGATTTTCTGGGGGTTTTCCAGAATTCATTTCCCGGTTTGGTGGGCTAAAACAGCTTGATTTAGGGAATAATATGTTTGTGGGTTCAATTCCTCAGAGTTTAGCAGCACTAAGGCTTGAAAAATTGGACCTTTCCCACAATAATTTTACTGGGGTTTTGCCACTTTTTGGGGAAACCAAGTTTGGGGCGGAGGCTTTTGAAGGGAATAGTCCTACTTTGTGTGGACCACCTTTGGCAAGTTGCAGCGGAAATTCTAGATTGAGTTCTGGTGCAATTGCCGCTATAGTTATCAGTCTGATGACCGGAGCTGTGGTTTTAGCTTCTTTGCTAATTGGGTATATGCAAAATAAGAAGAGGAAGGGTAGGAGAGAGAGTGATGATGAattggaggaagaagaagaagaagatggagatGAGGAAAATGGTGGAAACGCTGTTAGTGGAGCTGGTGAGGGGAAGCTTATGCTGTTCCAAGGCGGTGAGAATTTGACTTTAGATGATGTCTTGAATGCTACAGGCCAAGTTCTGGAGAAGGCATGTTATGGCACTGTCTATAAGGCAAAGCTTGCTGATGGAGGAACCATTGCTTTGAGGTTGTTGAGAGAAGGTAGCTGCAAGGATAGAGCTTCATGCTTGCCAGTGATAAAGCAATTGGGAAGAATTCGCCACGAGAATTTGGTTCCATTGAGAGCTTTCTATCAGGGGAAGAGAGGGGAGAAGTTACTTATTTATGATTATCTCCCTCTCAGAAATCTTCATGATCTTTTACATGAAACTAAATCAGGAAAACCAGTGCTGAACTGGGCTCGGCGACACAAGATTGCACTTTGCATAGCTAGAGGGCTAGCATATCTTCACACAGGAACTGATGTTCCAATTACTCATGGGAATGTAAGGTCCAAGAATGTGCTTGTGGATGAATTCTTCGTTGCGAGGCTGACCGAATTCGGGCTGGATAAACTAATGATTCCTGCTGTGGCTGATGAAATGGTGGCACTTGCGAAGACTGATGGCTACAAAGCACCAGAGCTTaaagagatgaagaaatgcaATTCCAGGACAGATGTATATGCATTTGGCATATTACTTCTGGAGATCTTGATTGGAAAGAAACCTGGGAAAAATGGGAGAGGTGGTCAGTATATGGACTTGCCAGCAATGGTGAAAGTTGCAGTTTTGGAGGAGACAACAATGGAAGTTTTTGATGTAGAACTTCTGAAGGGAATCAGGAGTCCCATGGAGGATGGAATGGTCCAAGCACTCAAGCTTGCAATGGGTTGCTGTGCTCCAGTGGCTTCAGTCAGACCAAGCATGGATGAAGTTGTGAGGCAATTGGAGGAGAATAGACCAAGGAACAGGTCTGCTTTATATAGCCCAACTGAAACAAGAAGTGGGAGTGGAACTCCATTTTG 2054 0.4236 MAVVRIFSLYISMSFFFFIFYTKVIALNESTSSSPSYDAELLLGQIRASLQGNAENLVLSSWNYSVPLCQWRGLKWVYSNGSPLSCDLSSPQWTNLSLFKDPSLHLFSLQLPSANLSGSLPRELGEFPMLQSFYLNINSLKGTIPLELGYSSSLSDIDLGDNLLTGTLPPSIWNLCDKLISLRLNGNLLSGPLPEPALPNSNCKNLQFLDLGENRFSGGFPEFISRFGGLKQLDLGNNMFVGSIPQSLAALRLEKLDLSHNNFTGVLPLFGETKFGAEAFEGNSPTLCGPPLASCSGNSRLSSGAIAAIVISLMTGAVVLASLLIGYMQNKKRKGRRESDDELEEEEEEDGDEENGGNAVSGAGEGKLMLFQGGENLTLDDVLNATGQVLEKACYGTVYKAKLADGGTIALRLLREGSCKDRASCLPVIKQLGRIRHENLVPLRAFYQGKRGEKLLIYDYLPLRNLHDLLHETKSGKPVLNWARRHKIALCIARGLAYLHTGTDVPITHGNVRSKNVLVDEFFVARLTEFGLDKLMIPAVADEMVALAKTDGYKAPELKEMKKCNSRTDVYAFGILLLEILIGKKPGKNGRGGQYMDLPAMVKVAVLEETTMEVFDVELLKGIRSPMEDGMVQALKLAMGCCAPVASVRPSMDEVVRQLEENRPRNRSALYSPTETRSGSGTPF 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01345 684 Gene3D Ribonuclease Inhibitor 178 297 IPR032675 -
Bva02g01345 684 SUPERFAMILY Protein kinase-like (PK-like) 388 660 IPR011009 -
Bva02g01345 684 Gene3D Phosphorylase Kinase; domain 1 367 460 - -
Bva02g01345 684 MobiDBLite consensus disorder prediction 663 684 - -
Bva02g01345 684 Pfam Leucine rich repeat 205 263 IPR001611 GO:0005515
Bva02g01345 684 MobiDBLite consensus disorder prediction 665 684 - -
Bva02g01345 684 SUPERFAMILY L domain-like 85 269 - -
Bva02g01345 684 Gene3D Ribonuclease Inhibitor 39 177 IPR032675 -
Bva02g01345 684 MobiDBLite consensus disorder prediction 334 359 - -
Bva02g01345 684 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 7 684 - -
Bva02g01345 684 ProSiteProfiles Leucine-rich repeat profile. 252 273 IPR001611 GO:0005515
Bva02g01345 684 Pfam Protein tyrosine and serine/threonine kinase 387 659 IPR001245 GO:0004672|GO:0006468
Bva02g01345 684 Gene3D Transferase(Phosphotransferase) domain 1 462 672 - -
Bva02g01345 684 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 7 684 - -
Bva02g01345 684 MobiDBLite consensus disorder prediction 341 355 - -
Bva02g01345 684 ProSiteProfiles Protein kinase domain profile. 384 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01345 Bva-Chr2 17187989 17189467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01345 15 684 Receptor kinase-like Gene Family AT3G24660 73.065 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva02g01345 PK_Tyr_Ser-Thr 3.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01345 - - gmx:100814814 1098.19