Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01343 atggaaatggaaatgaaaatgggAATGAGAACGGAACTAGAACTTCCGCAGCAAAACAACCTAAAGCAAAAATTGGCTAAAGTCTCTATTCCTAGAGAGCCCTCTATCACATGGTATGAGTCACTATTTGCTCGCATTGGAGAAACCctaagaaaggagaaagaaggtAGACCAACATTGACTGAggaattcaaaaagaaaatttctgaaTTAGGTGGtactaatgaaatttttatctaccAAAAGGCTCTTTTTGCAACAGATTTAACCCAGAACCACAACAGACTCTCCATGCCTTTAAAGCAAATCAAAACTGAAAATTTCTTGGAAGACCATGAGATTACACTtctcaataaaacaaattgttACATAGAAGTGTCACTCCTTCAGCCCTCCCTTAAGGTTTGGaaggatgatatttatttggCAAGATGGGATATGCATAAACACAACAACAGTGGTACCTGTTCTATGTATATTCTTAGAGGCACTTGGTTTCGTATGGCCAAAGCTAATAATCTCAAGGTGAATGATGTGATTCAGGTGTGGTCATTTAGGGTTCAAGGAAAATTATGGATTGCCTTGGTCAAGGTtta 596 0.3154 MEMEMKMGMRTELELPQQNNLKQKLAKVSIPREPSITWYESLFARIGETLRKEKEGRPTLTEEFKKKISELGGTNEIFIYQKALFATDLTQNHNRLSMPLKQIKTENFLEDHEITLLNKTNCYIEVSLLQPSLKVWKDDIYLARWDMHKHNNSGTCSMYILRGTWFRMAKANNLKVNDVIQVWSFRVQGKLWIALVKV 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01343 198 ProSiteProfiles B3 DNA-binding domain profile. 81 198 IPR003340 GO:0003677
Bva02g01343 198 Pfam B3 domain-containing protein At2g31720-like 74 166 IPR005508 GO:0003677
Bva02g01343 198 Gene3D - 71 197 IPR015300 -
Bva02g01343 198 SUPERFAMILY DNA-binding pseudobarrel domain 76 195 IPR015300 -
Bva02g01343 198 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 52 198 IPR005508 GO:0003677
Bva02g01343 198 CDD B3_DNA 78 193 IPR003340 GO:0003677
Bva02g01343 198 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 52 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01343 Bva-Chr2 17178847 17179443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01343 31 195 B3 DNA Binding Superfamily AT1G05930 25.134 4.50e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01343 - - lang:109335527 126.331