Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01342 ATGTTTGCTGCAGCTGCTGCAGCATGGGAAGCAGGGAAGCCGTCGGTTGTGGAACGTGTGGAGGTAGCCCCACCACAGGGCATGGAAacGCAAACTCCACTGTTTCCTCGAATTTTCGGTCATGAGGCTGCTGGAATTGTGGAAAGTGTTGGAGAAGGTGTCACAGACTTGCAAGTTGGGGATCATGTGCTCCCAGTATTCACTGGGGAATGTGGTGAATGTGCACATTGCAAATCTGAAGAAAGCAACTTGTGCGAACCCTTGAGAATAAACACAGATAGAGGAGTCATGCTTGATAATGGAAAATCCAGGTTCTCAATTAATGGCACCCCAATAAATCACTTTCTTGGCACATCCACCTTCAGTGAGTACACTGTGCTTCATTCAGGATCCTTAGCAAAGCTCAACCCAAAAGCTCCTTTGGATAAAGTCCGTGTCCTCAATTGTGGTATCTCAACAGGATTAGGAGCAACTCTGAACGTAGCAAAACTAAAGAAGGGTTCTTCAGTAGCTATTTTTGGCCTTGGAGCTGTTGGTCTTGCTGCTGCTCAGGGTGCAAGAATTTCTGCGGCTTCTAGGATTATTGGGGTTGATTTGAACCCAAATAGATTTGAGGAAGCCAAGAAATTTGGAGTAACTGAGTTTGTGAATCCAAAAGACTATGATAGGCCAGTTCAAGAGGGTTGGGGTGTTGCTTTACTTGTTGGAGTACCCGGCAAGGAAGCTGTTTTTATGACAAAGCCCATTAATGTGCTTAACGAGAGGACGCTTACAGGAACTTTCTTTGGAAACTACATGCCTAGGACTGATCTCCCATCTGTTGTTGAAATGTATATGAACAAGAAACTTgaacttcataaatttatcaCCCACAGTGTCCCTTTTTCTGATACAAACAAGGCATTTGACTTGATGGTGAAGGGAGAGGTCTTGAGGTGTATCATTAGCATGGAAGACTG 959 0.4411 MFAAAAAAWEAGKPSVVERVEVAPPQGMETQTPLFPRIFGHEAAGIVESVGEGVTDLQVGDHVLPVFTGECGECAHCKSEESNLCEPLRINTDRGVMLDNGKSRFSINGTPINHFLGTSTFSEYTVLHSGSLAKLNPKAPLDKVRVLNCGISTGLGATLNVAKLKKGSSVAIFGLGAVGLAAAQGARISAASRIIGVDLNPNRFEEAKKFGVTEFVNPKDYDRPVQEGWGVALLVGVPGKEAVFMTKPINVLNERTLTGTFFGNYMPRTDLPSVVEMYMNKKLELHKFITHSVPFSDTNKAFDLMVKGEVLRCIISMED 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01342 319 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 225 317 - -
Bva02g01342 319 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 4 227 - -
Bva02g01342 319 Pfam Zinc-binding dehydrogenase 177 225 IPR013149 -
Bva02g01342 319 Pfam Alcohol dehydrogenase GroES-like domain 30 134 IPR013154 -
Bva02g01342 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 140 282 IPR036291 -
Bva02g01342 319 Gene3D - 30 153 - -
Bva02g01342 319 Gene3D - 261 309 - -
Bva02g01342 319 PANTHER ALCOHOL DEHYDROGENASE 225 317 - -
Bva02g01342 319 PANTHER ALCOHOL DEHYDROGENASE 4 227 - -
Bva02g01342 319 SUPERFAMILY GroES-like 4 164 IPR011032 -
Bva02g01342 319 SUPERFAMILY GroES-like 267 315 IPR011032 -
Bva02g01342 319 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 40 54 IPR002328 GO:0008270|GO:0016491
Bva02g01342 319 Gene3D - 154 226 - -
Bva02g01342 319 Gene3D - 227 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01342 Bva-Chr2 17172752 17175971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01342 26 150 Monolignol Biosynthesis Gene Families AT1G72680 30.159 3.08e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01342 K18857 - egr:104426870 505.368