Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01341 ATGTCTCACATTCATAGGCTAAGAGCATCTCTACCAAAGagatttttctcaaacttttacTGTCAAAGCACtaaatttcttcattcatCTCCACTTGTGACAAATAACATGTCAAGCACTGCCGGGCTTGTAATTCCATGTAAAGCTGCTGTAGCATGGGAAGCAGGGAAGCCTTTGGTTATGGAACGTGTGGAGGTAGCTCCACCACAGGCCATGGAAGTGAGAATCAAGGTCAAATATACCTCACTTTGCCACACTGATCTCTTTTTCTGGGAGGCCAAGacGCAAACTCCTCTGTTTCCTCGAATTTTTGGTCATGAGGCTGCTGGAATTGTGGAAAGTGTTGGAGAAGGTGTCACAGACTTGCAAGTTGGGGATCATGTGCTTCCAGTATTCACTGGAGAATGTGGCGAATGTGCACATTGCAAATCTGAAGAAAGCAACATGTGTGAACTTTTGAGAATAAACACAGAAAGAGGAGTCATGCTTAGTGATGGAAAATCTAGGTTCTCAATTAATGGCACCCCAATAAATCACTTTCTTGGCACATCCACCTTTAGTGAATACACTGTGCTTCATTCAGGATGCTTAGCCAAACTCAACCCAAAAGCTCCTTTGGATAAAGTCTGTGTCCTCAGCTGTGGCATCTCAACAGGATTAGGAGCAACTCTGAATGTAGCAAAACCGAAGAAGGGTTCCTCAGTAGCAATTTTTGGGCTTGGAGCTGTTGGCCTTGCTGCTGCTGAGGGTGCAAGAATTTCTGGGGCTTCTAGGATTATTGGGATTGATTTGAACCCAAATAGATTTGAGGAAGCCAAGAAATTTGGAGTAACTGAGTTTGTGAATCCAAAGGACTACGATAGACCAGTTCAAGAGGTGATTGCAGACATGACTGATGGGGGAGTGGACCGCAGTGTTGAGTGCACTGGAAACATCAATGCTATGATTTCTGCTTTTGAATGTGTTCATGATGGTTGGGGAGTTGCTGTACTTGTTGGAGTGCCCAGCAAAGAAGCAGTTTTCATGACAAAGCCCATTAATGTGCTTAACGAGAGAACGCTTAAAGGAACTTTCTTTGGAAACTACAAGCCTAGGACTGATCTTCCATCTGTTGTTGAAATGTATATGAACAAgaaacttgaacttgataaatttattacccACAGAATTCCTTTTTCTGACATAAACAAGGCATTTGACTTGATGGTGAAGGGAGAGGGCTTGAGGTGTATCATCAGCATGGAAGACTA 1250 0.4152 MSHIHRLRASLPKRFFSNFYCQSTKFLHSSPLVTNNMSSTAGLVIPCKAAVAWEAGKPLVMERVEVAPPQAMEVRIKVKYTSLCHTDLFFWEAKTQTPLFPRIFGHEAAGIVESVGEGVTDLQVGDHVLPVFTGECGECAHCKSEESNMCELLRINTERGVMLSDGKSRFSINGTPINHFLGTSTFSEYTVLHSGCLAKLNPKAPLDKVCVLSCGISTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARISGASRIIGIDLNPNRFEEAKKFGVTEFVNPKDYDRPVQEVIADMTDGGVDRSVECTGNINAMISAFECVHDGWGVAVLVGVPSKEAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVEMYMNKKLELDKFITHRIPFSDINKAFDLMVKGEGLRCIISMED 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01341 416 CDD alcohol_DH_plants 45 412 - -
Bva02g01341 416 Pfam Zinc-binding dehydrogenase 242 370 IPR013149 -
Bva02g01341 416 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 105 119 IPR002328 GO:0008270|GO:0016491
Bva02g01341 416 Gene3D - 219 357 - -
Bva02g01341 416 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 205 379 IPR036291 -
Bva02g01341 416 Gene3D - 55 406 - -
Bva02g01341 416 Pfam Alcohol dehydrogenase GroES-like domain 73 197 IPR013154 -
Bva02g01341 416 SUPERFAMILY GroES-like 40 222 IPR011032 -
Bva02g01341 416 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 39 414 - -
Bva02g01341 416 SUPERFAMILY GroES-like 364 412 IPR011032 -
Bva02g01341 416 PANTHER ALCOHOL DEHYDROGENASE 39 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01341 Bva-Chr2 17167573 17171462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01341 73 406 Monolignol Biosynthesis Gene Families AT1G72680 24.484 4.34e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01341 K18857 - egr:104426870 715.687