Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01338 atgacGGGTGAAGTTGAACTGCAAGCTGCTGGAGATCTGCATGCAGCGATGGCAAATGATCAAACAAATGGTGTCGTTTTTGGTGGTGTTATGGACGTAGGTGAGAACTATTTGGGAGTTGACGAGACAGAGATCTGGCTTAAGAATGAACAAGAAGACGATCTTCTGAATGATGCTTCTATGTTCTATGCTGATTTTCCTCCTCTCCCTGATTTTCCATGCATGTCATCATCTTCGTCGTCTGCCTCAAATCCGGTGCCGGTGAAAACTGTGACGTGCTCCTCTTCGTCGCCCTCGGCATCATCGTCTTCTGCCGCTTCATGGGCGGTTTTGAAGTCAGATGCGGAAGACCAGCAGTATCAATATCATCATTGTTACAACCAGCATGATCCAGTGGATTCCACTGCCACTCCGGCAGCCCTGTCGTCCACTGCTTCCATGGAGGTCCCCCAGCAGCTGGATCACGGTGTTGACAACGGCGGTGGTTGCGGCGGAGTCGAGGACTGTTCCATTGACGTGATGGACAGTTTTGGATACATGGAACTTTTAGAGAACAATGATTTCTTCGACCCATCATCGATTTTTCCGAACGAAGAAAACCCTTTAGAGGATTTTCCTCAACAGTTTCAACAACCAGAGGAATATGAACTTGATTATGAACATGCATTTCAGACACAGCCACAGGCTCAGAAGGAGATCACTGATCCGGAAGATCAGCAGCAGCTTCTAATGGGTTCCAACAATAATGGAGAGATCATTCAAGGAGGAAGTGGCCCAGATGATGAAATGCACAAAGTGTTCTTGGAGTGGctcaaatcaaacaaagacAGTGTCTCTGCCAGTGATTTGAGGAGCGTGAAGCTCAAGAAATCCACCATCGAATGTGCTGCTAAGCGTTTGGGCGGAGGAAAAGAGGGCATGAAGCAACTGTTGAAGCTTATTCTCGAGTGGGTTCAAACCAGCCATCTTCAGAATAAAAGGCGTAAAGAAAGCATCCCCTCTTCAAACTTTGTCAACCACTTTCAGGATCCttgccaaaaccaaaacccaaACCCAGATTCATTTGGATTGGACCCAAACACTTCCTTCAACCAGACACAATGGATTCCTCCGGCGCTGCCATACGTGACGGATCCGGCTGGTGTCATGACTCCTTTTCCACAGCTCGGGTACGTGGGTGGTGATCCTTATCAGAACGGTGGAGCTGGATCAAATAATCCCAATGGTTACCATCCGGGCAGTGATTATCAAATGTTGGATTCTGCTCATTCATGGACGCAGTCTCAGTTTGGTGTTGGTCCTCACTATAATAATCCATCCTTACCGGATATTCACCCGGCGGCAAACGCTTTCGCCTCCACCGGATATGGGAATCAATATCCGTACAATTATTTGCATGGTCCTAGCGAAAGGTTAATGAGATTGGGACCATCTGCCACCAAAGAAGCTAGGAAGAAAAGGATGGCGAGGCAGAGACGGTATTTGTCGCATCACCGGCATGGAAACCACCATAGCCAGCAGAATCATAACCTCCAGAATCCGAGCACTGATACACAGACGAGACTGGGGAGTGATAATTGCACTCCTGCAATGGCTGCACATGCAAACTCATTCAACTGGATGTATTGGCCATCTGTGGTTGGTGGGGCCCCTTCCGCGGCACCAGTGGTTCCGTCGGAACCTCTTCCGGGTCAGCCGGCGTTGGATCGGACGGCCATGCAAACCCAAAATCATCATCAGGGTCGAGCATTATCAGACAGGCGGCAGggATGGAAACCTGAGAAGAACTTGAGGTTCCTTCTACAAAAGGTGTTGAAGCAAAGTGATGTGGGAAATTTGGGAAGAATTGTTTTGCCAAAGAAAGAGGCAGAAAGCCATCTGCCAGAACTGGAGGCAAGAGATGGCATTTCCATTGCTATGGAAGATATTGGAACTTCTCGTGTTTGGAATATGCGTTATAGATACTGGCCAAACAACAAAAGCAGGATGTATCTGCTTGAGAACACTGGGGAATTTGTGAGAGCCAATGGACTCCAAGAGGGAGATTTCATAGTGATATACTCAGATGTCAAGTGTGGCAAATATTTGATAAGAGGAGTGAAAGTGAGGCAAGCGGGGACGAAAGCAGAGAACAAGAAAGGAGGAGGAAAATCGCAGAAAAACCAGCAAGGAAATGCAGCAAAAGCCGCTACAGCTGGTGCAATGCTAATGCCCCCGCCATCTTCACCCAATAACAGTCAACGGCAGAAAACTGAGAAAGCAGCAAAAATAGGATTGGAAGGAAGACTTTA 2291 0.4692 MTGEVELQAAGDLHAAMANDQTNGVVFGGVMDVGENYLGVDETEIWLKNEQEDDLLNDASMFYADFPPLPDFPCMSSSSSSASNPVPVKTVTCSSSSPSASSSSAASWAVLKSDAEDQQYQYHHCYNQHDPVDSTATPAALSSTASMEVPQQLDHGVDNGGGCGGVEDCSIDVMDSFGYMELLENNDFFDPSSIFPNEENPLEDFPQQFQQPEEYELDYEHAFQTQPQAQKEITDPEDQQQLLMGSNNNGEIIQGGSGPDDEMHKVFLEWLKSNKDSVSASDLRSVKLKKSTIECAAKRLGGGKEGMKQLLKLILEWVQTSHLQNKRRKESIPSSNFVNHFQDPCQNQNPNPDSFGLDPNTSFNQTQWIPPALPYVTDPAGVMTPFPQLGYVGGDPYQNGGAGSNNPNGYHPGSDYQMLDSAHSWTQSQFGVGPHYNNPSLPDIHPAANAFASTGYGNQYPYNYLHGPSERLMRLGPSATKEARKKRMARQRRYLSHHRHGNHHSQQNHNLQNPSTDTQTRLGSDNCTPAMAAHANSFNWMYWPSVVGGAPSAAPVVPSEPLPGQPALDRTAMQTQNHHQGRALSDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAESHLPELEARDGISIAMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGEFVRANGLQEGDFIVIYSDVKCGKYLIRGVKVRQAGTKAENKKGGGKSQKNQQGNAAKAATAGAMLMPPPSSPNNSQRQKTEKAAKIGLEGRL 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01338 763 MobiDBLite consensus disorder prediction 479 525 - -
Bva02g01338 763 MobiDBLite consensus disorder prediction 706 763 - -
Bva02g01338 763 Pfam B3 DNA binding domain 602 697 IPR003340 GO:0003677
Bva02g01338 763 MobiDBLite consensus disorder prediction 485 505 - -
Bva02g01338 763 CDD BfiI_C_EcoRII_N_B3 599 700 - -
Bva02g01338 763 MobiDBLite consensus disorder prediction 506 525 - -
Bva02g01338 763 SUPERFAMILY DNA-binding pseudobarrel domain 600 694 IPR015300 -
Bva02g01338 763 ProSiteProfiles B3 DNA-binding domain profile. 601 703 IPR003340 GO:0003677
Bva02g01338 763 Gene3D - 597 714 IPR015300 -
Bva02g01338 763 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 42 750 IPR044800 GO:0003700
Bva02g01338 763 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 42 750 - -
Bva02g01338 763 SMART B3_2 601 703 IPR003340 GO:0003677
Bva02g01338 763 MobiDBLite consensus disorder prediction 738 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01338 Bva-Chr2 17152843 17155896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01338 10 734 B3 DNA Binding Superfamily AT3G24650 45.876 2.95e-166 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva02g01338 B3 1e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01338 - - gmx:100795226 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01338 02 17152843 17155896 Bva02g01338 02 17152843 17155896 ECH