Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01316 atgtcCCCAGCAGCAGGCTCTTCAAGATGGAGCCCAACCACTGAGCAGCTCATGATCTTGGAGGAACTCTACAAGAGTGGCATAAGAACTCCCACAGCTTCTCAGATTCAGCAGATAACAACTCACCTTTCTTTCTATGGCAGAATAGAAGGAAAGAATGTGTTCTATTGGTTTCAGAACCACAAGGCTAGGGATAGACAGAAGATGAGGAGGAAGCTCAACAAGCAAGTGCAGCTACAGCAGCAATTGCAGCTGCAGCAGTATTGTCATCTGAAGCATAATACCAGTCACCTTTTTCTTGCTGGCTTTGATTCTCTTCCTGAATCTTCAACTCAAAAAGTTTCTTTCTATAACACGGGCTTGTTTTCTCAGGGAAGCGCTGCCAGCACGCCAGAACAGGCACCAGATTTCACATGGAGGGTGCATAATCCACAAAGTTTGGAGGAGAAAACTGAGATGACATTCTGCAACTATGGCTGGAGACTGGTGGATAGTGGTGATTATCAAGGTTGCTCCTGTTGCATTCGACCTCTCAAGACTCTTGACCTCTTTCCAATCTCAGCAGCAAGACTCAAAGAAGAAGGCACTGCATCCACCAAGCAGCTCTTCCACTCTATGTCCACCAATTA 629 0.4579 MSPAAGSSRWSPTTEQLMILEELYKSGIRTPTASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKMRRKLNKQVQLQQQLQLQQYCHLKHNTSHLFLAGFDSLPESSTQKVSFYNTGLFSQGSAASTPEQAPDFTWRVHNPQSLEEKTEMTFCNYGWRLVDSGDYQGCSCCIRPLKTLDLFPISAARLKEEGTASTKQLFHSMSTN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01316 209 SMART HOX_1 5 72 IPR001356 GO:0003677
Bva02g01316 209 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 197 IPR044555 GO:0003700|GO:0099402
Bva02g01316 209 Gene3D - 2 68 - -
Bva02g01316 209 SUPERFAMILY Homeodomain-like 6 71 IPR009057 -
Bva02g01316 209 Pfam Homeodomain 8 67 IPR001356 GO:0003677
Bva02g01316 209 ProSiteProfiles 'Homeobox' domain profile. 3 68 IPR001356 GO:0003677
Bva02g01316 209 CDD homeodomain 9 69 IPR001356 GO:0003677
Bva02g01316 209 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01316 Bva-Chr2 17009756 17010698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01316 1 75 Wox Gene Family AT2G28610 81.333 3.44e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva02g01316 Homeodomain 8.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01316 - - gmx:102663963 236.113