Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01313 ATGCCTTTCTCTTTAAGGGCGATTACTCGGCTTCGCACTCTGCTAGGGTATAGAAATTGGACAAAGAAGGAATGGATAATCGCAGCCGCTGGCTTCACCATCATTGTCTTCGCATTTGCTCTCATCTCCAACTCCCGCCACACAGCGAACAAATCCGAACTCAACCACCTATTTGAGCTAAACCCCGGTAACGAGTTCGTGAAAATCACCCTTTCGAGCAAAGCAAAGGAAAGAGGCGCATTTTGTTTGGATGGGAGCTTACCAGGGTACCATTTCCAAAAGGGGTTCGGATCTGGGTCTGAAAATTGGTTGCTTCACATTGAGGGAGGAGGTTGGTGTGATTCCGTATCGACGTGTGCTTTCCGGAAAGGTACTAGGAGAGGATCAACAAACTATATGGAAAAAGGAATTCCTTTTCAGGGAATACTAAGCTCTAATCCCTTGCAAAATCCTGATTTTTTTAACTGGAACAAGGTCAAGATACGTTATTGTGATGGTGCTTCTCTGACTGGCCACCCAGAAAATGAGATTAAGAACGGGAGCAGATTATTCTTCCGAGGCCAACTTATTTGGGAAGCATTAATGGATGAAATCTTATCGATTGGCATGTCTAGAGCAAAACAGGCTTTTCTCTCCGGGTGCTCCGCAGGAGGGTTGGCAACTCTTCTCCATTGTGATGACTTTCGAGAACTTCTGCCAAAGGATACAGATGTCAAATGTCTTTCTGATGGAGGCTTTTTCCTTGATGTGAAGGATATTACTGGCAATAGCACCATGAGATCTTTCTATCAAAATGTTGTCCAGCTTCATGGTTCTGCGAAAAGTTTGCTCAAGGATTGTGTTGCTAAAATGGAACCATACAAGTGTTTTTTTCCTGAGGAAatcattaaaaacataaagacTCCAGTGTTCCTAGTCAACCCTGCTTATGATTTCTGGCAGATACAAAATGTATTAGTGCCAGGTGGATCAGATTCTCATGGCCACTGGAAAAACTGCAGATTGAACATTAATGCTTGTAATGGTGACCAGCTTGATGTACTTCAAGGTTTTCGGAGTTCTTTGCTGAAGGCAGTGAGTGAATCCCAGAAACGAAAGGAAGTGGGGATGTTTATAGATTCCTGCTTTAGTCATTGCCAAACTGTGTCTATAGAGACATGGCATTCACCATATTCTCccagaataaataataagAGCATAGCTGAATCAGTTGGTGATTGGTATTTCAACCGGGAAGAGGTGAAGCGAATTGACTGCCCGTTTCCATGCAACCCCACTTGCCGGAATGAGGATTTCACCGGAATATG 1307 0.4285 MPFSLRAITRLRTLLGYRNWTKKEWIIAAAGFTIIVFAFALISNSRHTANKSELNHLFELNPGNEFVKITLSSKAKERGAFCLDGSLPGYHFQKGFGSGSENWLLHIEGGGWCDSVSTCAFRKGTRRGSTNYMEKGIPFQGILSSNPLQNPDFFNWNKVKIRYCDGASLTGHPENEIKNGSRLFFRGQLIWEALMDEILSIGMSRAKQAFLSGCSAGGLATLLHCDDFRELLPKDTDVKCLSDGGFFLDVKDITGNSTMRSFYQNVVQLHGSAKSLLKDCVAKMEPYKCFFPEEIIKNIKTPVFLVNPAYDFWQIQNVLVPGGSDSHGHWKNCRLNINACNGDQLDVLQGFRSSLLKAVSESQKRKEVGMFIDSCFSHCQTVSIETWHSPYSPRINNKSIAESVGDWYFNREEVKRIDCPFPCNPTCRNEDFTGI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01313 435 PANTHER PECTIN ACETYLESTERASE 4 18 427 - -
Bva02g01313 435 Pfam Pectinacetylesterase 64 413 IPR004963 GO:0016787
Bva02g01313 435 PANTHER NOTUM-RELATED 18 427 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01313 Bva-Chr2 16998654 16998902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01313 7 398 Carbohydrate Esterase AT3G09410 60.459 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01313 K19882 - qsu:111992987 639.802