Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01258 ATGGAACTGTGGGATTCATGGGTTTGCTTCTGTCTGTTTTCTTGCTTCTGGGTCCTCAGTGTATGTGATCAGGATGGTTTCCTCAGTCTATCTTGTGGTGGAAGCAACAGTTTCAATGATTCATCTGGCATTTCGTGGATCCCAGACACTTTATACATAAGCACAGGCAAGACAACCACCATCAATTACAATGATGGTACATCCTCATTGAATGTCTCAGCTCGGTTCTTCCCAGATTCTAGAGACCGCCAATGCTACAGGATACCGGTGAACAATGCAACTTCTTTGCTCCTTGTTAGAGCGAAATTCGTGTACAAGAACTATGATAGACTTGGAATTCCCCCTACCTTCTCAGTTTCTCTTGGGACAGCTTTTGCTGCTGCAGTGAAACTTGCCAAAAATGATCCATGGACAGAAGAGTTTTTATGGACTGTGAATAAGGACACATTGCCTTTCTGCTTAAACTCCATACCAAATGGGGGTTCTCCTATCATTTCTTCGCTTGAAATTCGACCACTTCCAGAAGGAGCTTACACAAGTGGGATGTCAGATTTCCCAGATAAGTCACTAAGGAAGAGTTACCGAGTTGATTGTGGCTATGCTAACGGCTCTATCCAGTATCCAATAGATCCATATGATAGAACATGGGAAGCTGACAATAATTTTACACCCTTTCATGTTGCAACCGGCTTTAAGATTCAGCTTAGCTTCAATCAATCTAGTCTTATGGAGAAACCGCCTCCTGCTGTTCTTCAAACGGGGAGGGTTTTGGCGCGAAGAAATATGCTGACTTATAATCTTCCTCTTGATGCGTTAGGGGACTATTATATCATTCTCTATTTTGCTGGGATTCTTCCTGTGTTCCCTTCTTTTGATGTTTTCCTAAATGGGGATGTTGTAAAATCAAACTACACAGTAAAAAGCTCAGAAGTTAGTGCCTTGTATCTTACAAGGAAGGGAATCAGCAGCTTGAATGTAACACTCAAGAGTATCAGCTTCTACCCTCAGATTAATGCATTTGAAGTGTATGAGATGGTTGATATTCCCTCTGAAGCTTCTTCAACCACAGTTTCAGCTCTGCAAGTTATTCAGCAGTCCACTGGCTGGGACCTTGGATGGCAAGATGATCCTTGCTCTCCTTCACCATGGCATCATATAGGATGCGATGGAAACCTTGTTACATCACTGGATCTTTCAGACATAAACCTGAGATCAATCAGCCCTACATTTGGTGACTTGTTGGACCTTAAAACATTGGATTTGCATAACACATCGCTTACCGGTGAAATTCAGAATCTGGGCAGCTTACAAAATCTTGAGAAATTGAACCTAAGTTTCAATAAGCTAACATCCTTTGGCGTAGAACTGGAGAACTTGGCAAACCTTCAAATATTGGACTtgcaaaacaataatttacaAGGGACAGTTCCTGAAAGCTTGGGAGAGTTAGAAGATCTCCACTTATTAAATCtagaaaacaataaactaCAAGGTCCACTGCCAGAGtctatgaaaaaagaaagtttagaGATCAGAACATCTGGGAATTTGTGCCTTACTTTCTCCACAACCTCATGTGATGATGGTGCATCAGTATCCAATCCTTCAATTGAGGCACCACAAGTTACTATAATTCCCAAAAAGAAGCATAGTTCACATAATAGTCTAGCAATCATACTAGGCATGGTTGGTGGAGCTTTATTTGCCCTTCTCATGCTCTCTCTTTTAGTATTGTTATACATGActaaaaagagatatgcagctTCATACACATCAGGCATGGAGATGGATAAGAGGAACTGGGGTGCAGCAAAAGTCTTCTCCtacaaagaaatcaaagcaGCTACAAGCAAATTCAAAGAAGTTATAGGAAAGGGAAGCTTTGGATCTGTTTACCTTGGAAAGCTTCCAGATGGAAAATCAGTAGCTGTCAAAGTTCGATTTGACAAAACCCAACTGGGGGCAGATTCTTTCATCAATGAGGTCCATCTGTTGTCGAAAATACGGCACCAAAATCTTGTCTCTTTTGAAGGATTTTGTTATGAATCAAAGCATCAGATATTGGTTTATGAGTACTTGCCGGGTGGATCTCTGGCTGACCACCTCTATGGTACAAATAGCCAAAAAATTTCCTTGAGCTGGGTTAGAAGATTGAAGATTGCTGTTGATGCAGCAAAAGGATTGGATTATCTGCACAATGGAAGTGAACCGCGAATTATTCATCGTGATATAAAGTGCAGTAATATCCTCTTGGATGAAGAGATGAATGCCAAGGTCTGTGATTTTGGCCTCTCTAAAATAGTAACAAGGGAAGATGCAACTCATGTCACCACTGTTGTCAAGGGCACTGCTGGTTATCTTGATCCAGAGTACTATTCCACCCAACAGCTAACTGAGAAGAGTGATGTATATAGTTTTGGAGTTGTACTCTTAGAACTCATATGTGGGCGAGAGCCATTGAGTCATTCTGGAACACCAGACTCATTCAATTTAGTCTTATGGGCCAAGCCCTACTTTCAGGCAGGTGCATTTGAAATTGTGGATGAGAGCATAAGAGGAGCTTTTGATCCAGAGAGCATGAAGAAAGCAGCCTATATTGCTGTGAAGTCAGTTGAGAGATATGCATCTCAGAGGCCAACCATAGCAGAGGTATTAGCAGAGCTAAAGGAAGCATACAATATTCAACTCAGATTCCTTGAATCTTGTGAGCATGAGATTTG 2720 0.4037 MELWDSWVCFCLFSCFWVLSVCDQDGFLSLSCGGSNSFNDSSGISWIPDTLYISTGKTTTINYNDGTSSLNVSARFFPDSRDRQCYRIPVNNATSLLLVRAKFVYKNYDRLGIPPTFSVSLGTAFAAAVKLAKNDPWTEEFLWTVNKDTLPFCLNSIPNGGSPIISSLEIRPLPEGAYTSGMSDFPDKSLRKSYRVDCGYANGSIQYPIDPYDRTWEADNNFTPFHVATGFKIQLSFNQSSLMEKPPPAVLQTGRVLARRNMLTYNLPLDALGDYYIILYFAGILPVFPSFDVFLNGDVVKSNYTVKSSEVSALYLTRKGISSLNVTLKSISFYPQINAFEVYEMVDIPSEASSTTVSALQVIQQSTGWDLGWQDDPCSPSPWHHIGCDGNLVTSLDLSDINLRSISPTFGDLLDLKTLDLHNTSLTGEIQNLGSLQNLEKLNLSFNKLTSFGVELENLANLQILDLQNNNLQGTVPESLGELEDLHLLNLENNKLQGPLPESMKKESLEIRTSGNLCLTFSTTSCDDGASVSNPSIEAPQVTIIPKKKHSSHNSLAIILGMVGGALFALLMLSLLVLLYMTKKRYAASYTSGMEMDKRNWGAAKVFSYKEIKAATSKFKEVIGKGSFGSVYLGKLPDGKSVAVKVRFDKTQLGADSFINEVHLLSKIRHQNLVSFEGFCYESKHQILVYEYLPGGSLADHLYGTNSQKISLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDIKCSNILLDEEMNAKVCDFGLSKIVTREDATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLSHSGTPDSFNLVLWAKPYFQAGAFEIVDESIRGAFDPESMKKAAYIAVKSVERYASQRPTIAEVLAELKEAYNIQLRFLESCEHEI 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01258 906 Gene3D Ribonuclease Inhibitor 359 528 IPR032675 -
Bva02g01258 906 ProSitePatterns Protein kinases ATP-binding region signature. 623 645 IPR017441 GO:0005524
Bva02g01258 906 Gene3D Transferase(Phosphotransferase) domain 1 693 901 - -
Bva02g01258 906 SMART LRR_typ_2 436 458 IPR003591 -
Bva02g01258 906 SMART LRR_typ_2 459 483 IPR003591 -
Bva02g01258 906 Pfam Malectin-like domain 30 344 IPR024788 -
Bva02g01258 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Bva02g01258 906 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Bva02g01258 906 PANTHER OS07G0107800 PROTEIN-RELATED 10 904 - -
Bva02g01258 906 SUPERFAMILY Protein kinase-like (PK-like) 604 892 IPR011009 -
Bva02g01258 906 Pfam Leucine rich repeat 438 496 IPR001611 GO:0005515
Bva02g01258 906 CDD STKc_IRAK 623 890 - -
Bva02g01258 906 Pfam Protein tyrosine and serine/threonine kinase 618 887 IPR001245 GO:0004672|GO:0006468
Bva02g01258 906 SMART serkin_6 617 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01258 906 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 904 - -
Bva02g01258 906 Gene3D - 191 358 - -
Bva02g01258 906 ProSiteProfiles Protein kinase domain profile. 617 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01258 906 SUPERFAMILY L domain-like 359 506 - -
Bva02g01258 906 Gene3D Phosphorylase Kinase; domain 1 591 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01258 Bva-Chr2 16671664 16677376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01258 1 904 Receptor kinase-like Gene Family AT5G48740 62.611 0.0 1115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva02g01258 Malectin_like 1.2e-52 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01258 - - gmx:100812804 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01258 02 16671664 16677376 Bva02g01258 02 16671664 16677376 ECH