Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01249 ATGCTAGAATTTCTGATTGAGATTACTACAAAGATTATCGAGTATACTTTTGCATTCATATGGAAGCAGCTGTGTTATGTGTTGTTCTACAAAAACAATTTGAACAATCTAAAGGATCAAGTTAAGGATCTCGAAGGGCAAAGAGACAGAATCCAACATTGGGTTGATGCTGAAACAAGAAACGGGAAAACTATTTTCGATGACGTGCCCAAGTGGCTGCAGGAAGTGGAAATGGTCAGTCAAGAGGCAGAACAACTCCAAGGCAATGCAGACCATGCTAGTGTTGGATGCTGCCCTAATTTGCCATTGCGACATCAACTCGGTAGGAAAGCTGAATTTGAGGCGAAAAATGTTGgtgatttgaaaataaaaggagaaaaatttaCCAGTGTTGCATATGATTCTCCAAGTGAACCAGAGTTCACAGCCTATACAAGAGGAATTGAAATGTTTGAGTCAAGGATGTCAATTATGAATGAGATTATGCAAGCCATTACAGCCCCTAATATCAACATGGCGGGGGTCTATGGGCTAGGAGGAGTTGGTAAGACTACTTTCATGTATCAAGTTGCTTCAAAGGCTACACATGACAAGTCATTTGATGCAGTTGTTGTGGCTTCCGTAACCCAAACTCCAGACTTAAGTTTagttcaaacaaaaattgctGATCAATTGGATCTTAAACTTGAAAAGGAAACTCTTTTTGGTCGAGCACCAAGGCTACGGGAGCggataaaaagagagaaaagtattcttattatattagatGATATATGGGAAAGATTCGATATGAATGAATTGGGAATTCCTTTGGGCAACCACAAGAGTTGTAAAGTGTTAATAACTTCTAGAACTCAAGATGTGCTAAATGAAATGGGAAGCCAAAAGGATTTCAGATTAGAACCTTTAGATGAAAGTGAAACATGGAGGTTGTTCCAAGTTATGGCTGATGATGATGTTGTTAAAGATGGTCGGCTGCAAGGCATAGCAATCCAAGTGGCAAATAAATGTGCAGGCTTACCTGTTCTCATTGTTACAGTATCAAGGGCATTGAAAGGAAAAGGTATTCGTGCTTGGAAAGATGCCTTAACCAGGCTAAAAACAGTCGGTAACAAAGAACAAGCTGAGATATatcggtcagctttggagtTGAGTTATGACAGATTGGAGGGTAATGATATGAAGGAACTATTCTTGCTTTGTGCTGGAACCTCTAGTTCAATCAGCGACTTGTTGAAATATGGAATGGGTTTGGGCATTTTCAAAGATGTAAAAACTCTGGAAGAAGCGAGAAACAGACTTCACTCTATGATTGACAAATTGAAGGCTTCTTGCTTGTTACTGGATGATGGTAAAAGCACAGGGTTTGTCAAAATGCATGATAATGTTCGTGAAGTGGCTATCTTCATTGCATCCAGGGATGAACGTGttttcacatttaaaaatGATGCTGGTTTGATAGAATGGCCAACAGAAAGGTACACCAAAATCATGTTGGGAGAGTGCCATATCCATGAACTCCCTGAAATGTTGGATAACCCTGACCTCAAGCTGCTATACTTGAGTAGACTCAAGCAATCCTTGAAAATCCCAGATTGCTTCTTTGATGGAGTAATGAACCTCAAAGTGTTGGATTTAACTTGCTGGAACATATCTTCCTTACCCATGTCGTTGTCTTCCCTAACAAAGCTGAAGACATTGTGTTTGGATCAATGTGCTTTGGGAGGTATGTCTCCTCTAGCATCCTTGAAGAATATAGAAATTCTTAGCCTCTTGGAATCATCAATTATGATGTTGCCTTCCGAAATAGGGCAACTAACTCGTTTAAGGATGTTGGATTTGACCAATTCTACAATTGAACTCATCCCACCCAACATCATATCCAGGCTGATAAATTTGGAAGAGTTCTATGCAGGTGATACCTCCCTTAAGTGGGAGGCTGAAAATGCAACTCAGCATAACAAGAATGCTAGCATTGCTGAGCTGAGTCAACTGCCTCACTTGATTGCTCTAAACGTACAAATTCAAGATGTTTCAGTTTTGCCTCAAGATGACTCGTTCCTTGTGAAGTtggaaagatataaaattttcattggaGACAAATGGACTTGGACTTGGTCTGAGCGATTTGAAGACTCGAATATTTTGAAGCTCAAGCTCAATAATAGTTCTCATTTAGGACAAGGGATGAGAAAGTTACTTGAAGAAGTAGAAAATCTACATTTAGATAAAACTAAAACCATTTCAAGTGGGCTTTATCAATTGAATTATGAAgggtttttaaaattgaagaagCTCCGCattcaaaataatgatgaaattCACCATATTATTAACTTCAGGTTTATTCAACCCCATGATGCCTTTCCGAACTTGGAGGTACTAAATCTTTACAATCTCAGTAAGTTAGAAAAGATATGTCAAGAGACTCTCACAAGGATATcttttcaaaaacttaaagTAATCATAGTCAAAAGTTGTGACCAATTGAAAAGTCTCATAACATCTTCAATGGTTAGAGTGCTTTCTCAACTTCAAGAAATTGAAGTTTCTGAATGCAATTTGATGAAGGATATTGTGTTCTCAGATGATAATGAAACGGTGATCAAATTTCATCAGTTGCGTTCTCTCAATTTACAACATCTGCCAACACTTACTGAGTTTTACTCGGATGAACTGAACACTTTAGAGTCCAAGCCACTTTTTTGCTCCAAGGTTGCATTTTACAATTTGGAAACCTTGAAGTTGAGCtcaatcaatttgaagaaattatggGATGATTCTCAATTTTTGACCAGTTGTTGCGTTCAAAATTTAACCAAGTTGATTGTGGAGGGTTGTGGAAACATAAAGTACTTATTTTTGTCCTCCATGATTGGAAGCTTCTCAAAGCTCAAAATGCTAGAAATAAGTAATTGTCATGAAATGGAGGAGATTGTGGCtgcagaagaaggaagaaacgAAGGAGTTAACTTAGCTGAGagaaaattttttagtcTAGAGACGATCATGGTCACTGGGTGTAGTTCATTGGAAAAGATATTCGAATTGaatgcaaatgaaaatgaaaaggagagtAAGGTGAATACACAACTTAGAATTTTGACTCTACATGATCTGCCAAATCTCAAGGAGATATGGTGTGGAGATGCCCAGGGAATCCTTTGTTTTCATAATCTTGAAATAGTGCGTGTCGAGAACTGTCCAAGATTAGTATATGTCTTTCCTCTCTCCATAGCCATGAGCCTCCCTCAACTTgaagaaattatcataaaaggAGCATGGGACATGAAAGAATTTGTTGCAAAAATGGGAGGATACAAGGAAGAAAGTGTTAAGTTTGAGTTTAATCGACTAACCACGTTAATTATATGGGATTTGGGAATAGTCGACAGATTCTTTGCTGGAAATTTCTCTTTAGATTGTCCATCATTGAAAATATTAGATGTATTTAATTGTCCCAAACTGGAGTTATACAACACGCAATCCATGAGCTACCCAGAAAGAAATCATGATGGTGACAGTAATGTTTCAACTGGACAACCGTTTTTCAAGGTCGAAGAGGTGTTTCCCATGTTGGAGCAATTGACTCTTACAGGTAAGGATGTTGGCTTGATTCAGCAAGGCCAATTTCGAGGTGACCTCTACAGTAAACTGGCTGTTCTTTGGCTACaagattttgatgatgaagatgccACCTTTCCATACTGGATTCTTCAAAAATTACCCAATTTAAGATCTCTTCGTATTCGGTGTTGTTCATTCAAGGAGATATTGCATGAAGGTGAGAAAGGACAAATTGAAATTGCTACACGACTAAAAAAGTTTGTTCTATCTAATGTGCATAAAATTCAGTATTTATGCAAAGAAGGAACTCAACTAGACCCGACGCTTCAGGTTGTTGAGATTATCCAAATATATCAATGTTCTGGATTGGTGTATTTAGTGCCCTCCTATGTTACTTTTAGTCACTTGACAGGATTGCGTGTTTGTAAGTGCAATGGGTTGCTATACTTAATTTCATCCTCAACAGCAAGAAGTCTCATCCAACTCATACAAGTGAAAATTGAGGAGTGCGAATCACTTGAAGAAATAGTGAAAGAAAAGGGAGATGATGAGATAGAACAAAATATTGGATTCAGCAATTTGAGATTGTTGGAACTAAAATGTTTGCCAAGACTCAAGTGGTTTAGCTCAATTAAGTGTCTCCACTGGTTCCCAAAATTGGCAAAAGTAGTTGTGAAGCAATGTCCTGGAATGAAGGCGTTCTCTGTTGGGCATTCAAGCACACCATTACTTCGAAAGGTGGAAGCAGACGAAGGATGGTTGTGGGAGGATAACCTTAATACAACTACACAGAAGATTAATGTTGGTTTTCCTGCACAGCAAATGAAGATGCTTGAGCACCGGCAGCAAGAATCAGTGGAATTTCTCTA 4436 0.3618 MLEFLIEITTKIIEYTFAFIWKQLCYVLFYKNNLNNLKDQVKDLEGQRDRIQHWVDAETRNGKTIFDDVPKWLQEVEMVSQEAEQLQGNADHASVGCCPNLPLRHQLGRKAEFEAKNVGDLKIKGEKFTSVAYDSPSEPEFTAYTRGIEMFESRMSIMNEIMQAITAPNINMAGVYGLGGVGKTTFMYQVASKATHDKSFDAVVVASVTQTPDLSLVQTKIADQLDLKLEKETLFGRAPRLRERIKREKSILIILDDIWERFDMNELGIPLGNHKSCKVLITSRTQDVLNEMGSQKDFRLEPLDESETWRLFQVMADDDVVKDGRLQGIAIQVANKCAGLPVLIVTVSRALKGKGIRAWKDALTRLKTVGNKEQAEIYRSALELSYDRLEGNDMKELFLLCAGTSSSISDLLKYGMGLGIFKDVKTLEEARNRLHSMIDKLKASCLLLDDGKSTGFVKMHDNVREVAIFIASRDERVFTFKNDAGLIEWPTERYTKIMLGECHIHELPEMLDNPDLKLLYLSRLKQSLKIPDCFFDGVMNLKVLDLTCWNISSLPMSLSSLTKLKTLCLDQCALGGMSPLASLKNIEILSLLESSIMMLPSEIGQLTRLRMLDLTNSTIELIPPNIISRLINLEEFYAGDTSLKWEAENATQHNKNASIAELSQLPHLIALNVQIQDVSVLPQDDSFLVKLERYKIFIGDKWTWTWSERFEDSNILKLKLNNSSHLGQGMRKLLEEVENLHLDKTKTISSGLYQLNYEGFLKLKKLRIQNNDEIHHIINFRFIQPHDAFPNLEVLNLYNLSKLEKICQETLTRISFQKLKVIIVKSCDQLKSLITSSMVRVLSQLQEIEVSECNLMKDIVFSDDNETVIKFHQLRSLNLQHLPTLTEFYSDELNTLESKPLFCSKVAFYNLETLKLSSINLKKLWDDSQFLTSCCVQNLTKLIVEGCGNIKYLFLSSMIGSFSKLKMLEISNCHEMEEIVAAEEGRNEGVNLAERKFFSLETIMVTGCSSLEKIFELNANENEKESKVNTQLRILTLHDLPNLKEIWCGDAQGILCFHNLEIVRVENCPRLVYVFPLSIAMSLPQLEEIIIKGAWDMKEFVAKMGGYKEESVKFEFNRLTTLIIWDLGIVDRFFAGNFSLDCPSLKILDVFNCPKLELYNTQSMSYPERNHDGDSNVSTGQPFFKVEEVFPMLEQLTLTGKDVGLIQQGQFRGDLYSKLAVLWLQDFDDEDATFPYWILQKLPNLRSLRIRCCSFKEILHEGEKGQIEIATRLKKFVLSNVHKIQYLCKEGTQLDPTLQVVEIIQIYQCSGLVYLVPSYVTFSHLTGLRVCKCNGLLYLISSSTARSLIQLIQVKIEECESLEEIVKEKGDDEIEQNIGFSNLRLLELKCLPRLKWFSSIKCLHWFPKLAKVVVKQCPGMKAFSVGHSSTPLLRKVEADEGWLWEDNLNTTTQKINVGFPAQQMKMLEHRQQESVEFL 1478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01249 1478 PANTHER - 1305 1451 - -
Bva02g01249 1478 SUPERFAMILY L domain-like 783 1161 - -
Bva02g01249 1478 SUPERFAMILY L domain-like 459 889 - -
Bva02g01249 1478 Pfam NB-ARC domain 158 387 IPR002182 GO:0043531
Bva02g01249 1478 Gene3D - 142 299 IPR027417 -
Bva02g01249 1478 PRINTS Disease resistance protein signature 337 351 - -
Bva02g01249 1478 PRINTS Disease resistance protein signature 245 259 - -
Bva02g01249 1478 PRINTS Disease resistance protein signature 172 187 - -
Bva02g01249 1478 PRINTS Disease resistance protein signature 960 976 - -
Bva02g01249 1478 Coils Coil 27 47 - -
Bva02g01249 1478 Gene3D - 302 390 IPR042197 -
Bva02g01249 1478 PANTHER RPP4C3 1056 1164 - -
Bva02g01249 1478 Gene3D Ribonuclease Inhibitor 495 984 IPR032675 -
Bva02g01249 1478 Gene3D Ribonuclease Inhibitor 1191 1440 IPR032675 -
Bva02g01249 1478 Gene3D Ribonuclease Inhibitor 1027 1171 IPR032675 -
Bva02g01249 1478 Coils Coil 424 444 - -
Bva02g01249 1478 PANTHER - 25 1029 - -
Bva02g01249 1478 PANTHER RPP4C3 25 1029 - -
Bva02g01249 1478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 401 IPR027417 -
Bva02g01249 1478 SUPERFAMILY RNI-like 1189 1424 - -
Bva02g01249 1478 PANTHER RPP4C3 1305 1451 - -
Bva02g01249 1478 PANTHER - 1056 1164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01249 Bva-Chr2 16584159 16590173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01249 169 438 WRKY Transcription Factor Family AT5G45050 24.913 2.96e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01249 - - aip:107625541 1098.96