Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01230 ATGGGGTTTCCACAGGCAAGAGCAATGCGAGCACTTTATTATTCTGGCAATTCTAGCTTAGACGATGCTTTGAATTGGATAGTTGAACATGAGAATGATGCTGATATCGATGAGCTGCCATTGGTAGATGTAGATATTGAAATCGAGTCTTCTGAACCATTCCCCGTATcagaagaaatcaaaagagCAGAGCAGTTAAGAGATGAAAACCGTAAAAGgaaagaggaggaagaaaaaaaattgcagagagaaagggagaagGAGAGGATTCAAGCAGGTAAGAATCTTCTGGAGGCAAAGCGAATTGctgaacaaaatgaaagaaaacgGAATTTGGCCCTACGAAAAGCTGAGAAAGAACAAGAGAAAAGAGCAAGAGAAAAAGTTCGCCAGAAACTGGAGCAGGATAAGcTAAATAGAAGGTCTATGCTTGGTGGAAATCCCCAAGAAAGCCATGCAGCTGTGAATTCTTCAGCTATTCGAGTACAGGAAGAAAGGAATTCGAAGCCAGTTTACAAGGTTGCAAAAACTGACCACTTGAGCAACTGTTTGAGATCTCTCAAGCGTAACCACAAGGGTGAAGATGCCAGAGTCAGAAGAGCTTTTCAAACACTTCTAATTTATGTTGGAAATGTTGTCAAGAATCCCAATGAGGAAAAATACAGGAAGATTAGACTAAGCAACCCAGTATTCCAGGATAGAGTTGGAAGTTTGAAAGGAGGTGTTGAATTTCTTGAGCTCTGTGGGTTTGAGAGAGTAGGTGAGTTCTTGTGTCTTCCTCACGAAAAGGTTGACACGGAAGTTCTAAAATCAGCTGGTTCTGCATTAAACACTGCAATAACAAACCCCTTCTTTGGACTTTTAAGTACTTA 872 0.3727 MGFPQARAMRALYYSGNSSLDDALNWIVEHENDADIDELPLVDVDIEIESSEPFPVSEEIKRAEQLRDENRKRKEEEEKKLQREREKERIQAGKNLLEAKRIAEQNERKRNLALRKAEKEQEKRAREKVRQKLEQDKLNRRSMLGGNPQESHAAVNSSAIRVQEERNSKPVYKVAKTDHLSNCLRSLKRNHKGEDARVRRAFQTLLIYVGNVVKNPNEEKYRKIRLSNPVFQDRVGSLKGGVEFLELCGFERVGEFLCLPHEKVDTEVLKSAGSALNTAITNPFFGLLST 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01230 290 Gene3D - 1 37 - -
Bva02g01230 290 MobiDBLite consensus disorder prediction 142 164 - -
Bva02g01230 290 CDD PUB_UBA_plant 184 288 - -
Bva02g01230 290 MobiDBLite consensus disorder prediction 113 167 - -
Bva02g01230 290 Coils Coil 102 139 - -
Bva02g01230 290 Coils Coil 56 91 - -
Bva02g01230 290 SMART PGNneu 200 261 - -
Bva02g01230 290 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 1 290 - -
Bva02g01230 290 SUPERFAMILY PUG domain-like 178 284 IPR036339 -
Bva02g01230 290 MobiDBLite consensus disorder prediction 57 87 - -
Bva02g01230 290 Gene3D - 181 279 - -
Bva02g01230 290 PANTHER F13M7.16 PROTEIN 1 290 - -
Bva02g01230 290 MobiDBLite consensus disorder prediction 113 139 - -
Bva02g01230 290 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 30 IPR015940 -
Bva02g01230 290 Pfam PUB domain 197 266 IPR018997 -
Bva02g01230 290 SUPERFAMILY UBA-like 1 40 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01230 Bva-Chr2 16428289 16431914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01230 1 288 C2H2 Transcription Factor Family AT1G04850 59.247 3.76e-96 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01230 K24348 - gmx:100781260 383.259