Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01221 ATGGCAGTAGAtctcaataataaaagtgTCCTAAAGAGCGATGAACTTTATCAGTATATACTTGAAACTAGTGTTTATCCAAGAGAGCCCCAGTGCTTGAAGGAGCTTCGCCAATTGACAACAAAACACCCTGGGAATGTCATGGCCACTCCAGCAGACGAAGGACAACTGATGAGCATGCTGCTTAAGCTCATCAACGCAAAGAACACCATAGAAATTGGTGTATACACTGGTTACTCTCTTCTCACCACTGCCCTTGCTCTTCCCCATGATGGAAAGATCTTGGCAGTGGACATCAACAGGGAAGATTATGAACTGGGATTGCCCATAATTAAGAAAGCTGGGGTTGCTCACAAGATTGACTTCAGAGAAGGACCTgctcttcctcttcttgacCAATTGATCCAAGATGAAAATAACAAGGGAGCATACgactttgtttttgttgatgCTGATAAGGATAACTACTTAAACTACCACAAGAGGGTGATTGAGCTGGTAAGGGTTGGGGGTTTGATTGGGTACGATAACACCCTATGGTGTGGGACTGTGGTTGCTCCACCCGATCACCCTTTATTGCAGCTAGACCATGTTAAGCATTGTAGGCCTTTTGTGTTGGAGTTCAACAAGGCACTGGCCATTGATCCCAGGATTGAGATTTGCCACCTTTCTATTGGCGATGGCATCACTCTTTGTCGCCGCATAAGCTA 710 0.4211 MAVDLNNKSVLKSDELYQYILETSVYPREPQCLKELRQLTTKHPGNVMATPADEGQLMSMLLKLINAKNTIEIGVYTGYSLLTTALALPHDGKILAVDINREDYELGLPIIKKAGVAHKIDFREGPALPLLDQLIQDENNKGAYDFVFVDADKDNYLNYHKRVIELVRVGGLIGYDNTLWCGTVVAPPDHPLLQLDHVKHCRPFVLEFNKALAIDPRIEICHLSIGDGITLCRRIS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01221 236 Gene3D Vaccinia Virus protein VP39 1 236 IPR029063 -
Bva02g01221 236 CDD AdoMet_MTases 71 173 - -
Bva02g01221 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 234 IPR029063 -
Bva02g01221 236 Pfam O-methyltransferase 22 235 IPR002935 GO:0008171
Bva02g01221 236 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 235 IPR002935 GO:0008171
Bva02g01221 236 PANTHER O-METHYLTRANSFERASE-RELATED 3 235 - -
Bva02g01221 236 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 3 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01221 Bva-Chr2 16378103 16379920 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01221 4 236 Monolignol Biosynthesis Gene Families AT4G34050 72.961 1.05e-131 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01221 K00588 - gmx:100795858 375.17