Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01220 ATGGACATCAACAGGGAAGATTATGAACTAGGATTGCCCATCATTGAAAAAGCTGGGGTTGCTCACAAGATTGACTTTAGAGAAGGACCTGCCCTTCCTCTTCTTGACCAATTGATCCAAGATgaaaataaaaagggagcATACGACTTCGTTTTTGTTGATGCTGACAAGGAGAACTACTTGAACTACCACAAGAGGGTGATTGAGCTGGTAAGGATTGGAGGTTTGATTGGCTACAATAACACCCTATGGTTTGGCTCTGTGGCTGCCCCACCCAATGCTCCTCTCATGGACATGGAAGACATTAGGCATTATAGGCCTTTTGTGTTAGAGCTAAACAAGGCACTGGCCATTGACCCCAGGATTGTGATTTGCCAGCTTCCTGTTGGTGATGGCATTACTATTTGTCGCCGCATAAGCTA 422 0.436 MDINREDYELGLPIIEKAGVAHKIDFREGPALPLLDQLIQDENKKGAYDFVFVDADKENYLNYHKRVIELVRIGGLIGYNNTLWFGSVAAPPNAPLMDMEDIRHYRPFVLELNKALAIDPRIVICQLPVGDGITICRRIS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01220 140 Gene3D Vaccinia Virus protein VP39 1 139 IPR029063 -
Bva02g01220 140 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 1 139 - -
Bva02g01220 140 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 138 IPR029063 -
Bva02g01220 140 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 139 IPR002935 GO:0008171
Bva02g01220 140 Pfam O-methyltransferase 1 139 IPR002935 GO:0008171
Bva02g01220 140 PANTHER O-METHYLTRANSFERASE-RELATED 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01220 Bva-Chr2 16376306 16377247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01220 1 140 Monolignol Biosynthesis Gene Families AT4G34050 75.714 5.31e-77 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01220 K00588 - gmx:100795858 234.187