Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01217 ATGGCCACTCCAGCAGACGAAGGACAACTGCTGAGCATGCTGCTTAAACTCATCAACGCAAAGAACACCATCGAAATTGGTGTATACACTGGTTACTCTCTTCTCACCACTGCCCTTGCTCTTCCCCATGATGGAAAGATCTTGGCAGTGGATATCAACAGGGAAGATTATGAACTGGGATTGCCCATAATTAAGAAAGCTGGGGTTGCTCACAAGATTGACTTCAGAGAAGGACCTgctcttcctcttcttgacCAATTGATCCAAGATGAAAATAACAAGGGAGCATACgactttgtttttgttgatgCTGATAAGGATAACTACTTAAACTACCACAAGAGGGTGATTGAGCTGGTAAGGGTTGGGGGTTTGATTGGGTACGATAACACCCTATGGTGTGGGACTGTGGTTGCTCCACCCGATCACCCTTTATTGCAGCTAGACCATGTTAAGCATTGTAGGCCTTTTGTGTTGGAGTTCAACAAGGCACTGGCCATTGATCCCAGGATTGAGATTTGCCACCTTTCTATTGGCGATGGCATCACTCTTTGTCGCCGCATAAGCTA 569 0.4323 MATPADEGQLLSMLLKLINAKNTIEIGVYTGYSLLTTALALPHDGKILAVDINREDYELGLPIIKKAGVAHKIDFREGPALPLLDQLIQDENNKGAYDFVFVDADKDNYLNYHKRVIELVRVGGLIGYDNTLWCGTVVAPPDHPLLQLDHVKHCRPFVLEFNKALAIDPRIEICHLSIGDGITLCRRIS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01217 189 Pfam O-methyltransferase 1 188 IPR002935 GO:0008171
Bva02g01217 189 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 1 188 - -
Bva02g01217 189 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 188 IPR002935 GO:0008171
Bva02g01217 189 PANTHER O-METHYLTRANSFERASE-RELATED 1 188 - -
Bva02g01217 189 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 187 IPR029063 -
Bva02g01217 189 CDD AdoMet_MTases 24 126 - -
Bva02g01217 189 Gene3D Vaccinia Virus protein VP39 1 188 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01217 Bva-Chr2 16368727 16369458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01217 1 189 Monolignol Biosynthesis Gene Families AT4G34050 75.132 1.30e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01217 K00588 - gmx:100795858 314.694