Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01208 ATGAAGTTACTCTTCTCTCTCACGTTGCAAATGCTATCTTTCACTGATTTACTCATTCTCAAACCCATTTTCTTACATGCATTCACTGGTTTTCTCCACCTAGTATTGCTAGCTACTTTCTTTGTCTTGTGGGTGTGCAAGAAAATCATAGTAAATGATAGAGAAGATCCAGAGAAAAAGTTCAAGAACTCTTTGCCGAAGAAGACTCTCTTTTGTTCTTTGGGTGTCTCTGGGTTCAATCTTATCCTATGTCTGTTTAATTACTTCTATTTCAAAAATGATGGTTGGTCTGAAGAATCAATTGTGACCCTTTTGGATTTAACAATCAGAACAGTTGTTTGGGCTGCTATCTACGTTTACTTGCGTGCACGTTTCAATAGCTATGGTGAAAAAAGGTTTCCATTATTCTTCAGAATTTGGTGTGGCTTCTACTTCGTTTTTTGCTCTTACTGCTTGATAGTAGACATTATTCTCTATGTACGACAAGTTTCATTTCCAGTTCAATACATAATTTCTGATGTCGTCTCAGTGTTCGTGGGTTTGTTCTTCTGCTATGTGGggatttttgtgaaaaatgagGAGGAGGATAATATTCTTGTTGAACCTCTTCTGAATGATGATGCAAATGTTAGTACCAAGGGGAGTGAAACTGTTACCCCTTATTCAAATGCTGGAATTTTCAGTATTCTTACCTTCTCTTGGATGAATCGTCTAATTGCTGTTGGAAATAAGAAGGTTTTAGACCTTAATGATGTTCCACAACTTGCCAGCCGTGATAGTGTATTTGGAGCTTTTCCAATTTTCAGGGATAAGCTTGAGGCAAATTGTGGTACAATTAGCCGTGTGACAACAATTAAGCTGGTGAAGTTGCTATTCTTCTATGCATGGAAAGATATTCTTCTGACAGTATTTTTATCAACTCTATACACTGCAGCTTCTTATGTTGGTCCATATCTTATTGACACTTTGGCTCAATACCTCAATGGAGAAAGGAAGTTTAAGAATGAGGGTTATCTTCTGGTGTTTGCATTTTCTGCTGCAAAGCTCACAGAGTCTCTTACTATGAGGCAGTGGGTGTTTAGGTTTTTCCAAGTTGGCGGTAGGATCCGTGGACTGCTAGTCACAGTAATCTATAATAAATCATTGACACTTTCTTGTCAATCAAGACAGAGTCACACCACTGGGGAAATGATTAATCTCATGGCCGTTGATGCTGAAAGAGTTGGCAATTTCAGTTGGCGCTTGGTTGATATGTGGGCTGTACTCCTGCATCTTGTGTTTGCCTTTCTGATTTTGTATGGAAATCTTGGGCTTGCTTCTATAGCTGCATTTGTTGCAACTGTCATTTTGATGCTGGGAAATATTCCTTTGGGAAAATTGCAAGAGAAGTTTCAAGGCAAGTTGATGGATTCAAAAGACACAAGAATGAAGGCCACATCTGAGATTCTAAGAAACATGAGGATTCTCAAACTCCAAGGATGGGAGATGAAGTTTCTGTCTAAGATTACAGAACTGAGGAAATCCGAGGAAGGCTGGttgaaaaaatatgtttatactAGTGCCTTGACAACGTTTGCCTTCGGAGTTGCTCCCACATTTGTGTCTGTGGTTACTTTTGGCACTTGTATACTCATAGGGGTCCCACTTGACTTAGGAAAGATCTTATCAGCACTTGCAACTTTTGGACTTCTTGGAGCTCCAATCTATAGTCTTCCACATACAATTGCAGCATTAGTACAAGCAAAGGTTTCCCTCGATAGGATTTCATCATTCCTACATCTCGATGAAGTGCAGTCTGATGCCATAGAAAAGCTTCCAAGAGGTAGTTCAGATAAAGCAATTGAAGTTATTGTTGGAAATTTCTCATGGGATTTATCATCCTCCAATATGACATTGAAAAGTATAAATCTTTGTGTTTCTCATGGCATGAGGGTTGCAGTTTGTGGTACTGTCGGCTCAGGCAAGTCTAGCTTACTTTCCTGCATTTTGGGGGAAATTCCAAAGGTATCAGGTACACTCAAGGTGTGTGGAACCAAGGCCTATGTTGCTCAGTCACCTTGGATACAAAGTgggaaaatagaagagaatatATTGTTTGGTAAAGAGATGGACAGGGAAATGTATGACAAGGTGCTTGAAGCATGCTCCTTGAAGAAGGACTTGGAGGATCTGCCACTTGGTGATCAAACGATGATAGGGGAGAGGGGAATCAATTTGAGTGGAGGGCAGAAACAAAGAATACAAATTGCACGTGCCCTGTACCAAGATGCTGATATTTATCTGCTCGATGACCCTTTCAGTGCGGTGGATGCTCATACAGGATCCCACCTCTTTAAGGAATGTTTACTGGGAATTTTAAGTTCAAAGTCAGTAGTTTACGTCACTCATCAAGTAGAATTCTTACCTTCTGCTGACCTCATATTGGTCATGAAAGATGGAAAGGTTACTCAGTGTGGAAAGTATTATGATTTGTTCAACTCAGGGACTGATTTCATGGAACTCGTTGGTGCACATAAAAAAGCTTTGTCTGCTCTAGATTCGTTGGATGGAGGGAAAATTTCTAACCCAGAACAAGAAGTAAATGTGAATGGTGCTGAAagagttgaagaaaatgaggagagaaaaaatataaaagatagtAGAGTAGATGACATAGTTGAGCAGAAAGGCCAGCTAgttcaagaagaagaaagagagaaagggaaagttGGGTTTCCAATATATTGGAAATATATCAGGACAGCATATGGAGGAGCTCTTGTGCCATTTATATTGTTGGGTCAAATTCTGTTTCAGATTCTTCAGATTGGAAGCAACTATTGGCTGGCTTGGGCAAGTCCCACTTCACCAGAAGTAAAACCAGCTGTTGGACTGTCTACCCTTACACTTGTCTATGTTGCTTTGGCAGTGGGAAGTTCTTTCTGCATTCTTGCCAGAGAGACACTTGTTGTGACAGCTGGTTTTAGGACAGCTACTCTACTCTTCAATAAAATGCACTTCTGCATTTTCCGTGCACCCATGTCATTTTTCGATGCAACCCCAAGTGGAAGAATCCTTAATAGAGCTTCTACAGATCAAACTGCAGTGGATATAAGCATTCCATATACAATTGAGGAATTTGTTTTCTCCATGGTCCAGCTTCTCGGAATTATAGCAGTAATGTCTCAGATTGCATGGCAGGTTTTTATCATCTTCATACCTGTGGTAGCTATCAGCATCTGGTATCAGCAATATTACCTACCATGTGCACGAGAACTGCAACGATTAGTTGGAGTATGCAAAGCTCCGGTGATACAACACTTCTCCGAGACAATTTCGGGAGTAACAACCATCAAGAGCTTTGATCAAGAGGCGAGATTTCAGGGAACAAATATGAAACTGACAGATGGGTATGCTCGGCCAAGGTTCCATGTTTCTGGTGCAATGGAATGGCTGTGCTTTCGTATGGATATGTTATCTTCTATCATATTTGTATTCTCCTTGATATTTTTGATATCTATTCCTGAGGGAGTCGTAGATCCAGGCATTGCTGGGTTAGCCATTACTTATGGACTTAATCTCAACATGGTGCAAGCCATGATGATATGGAATCTTTGCTCAATGGAGAACAGTATTATATCAGTAGAAAGAATACTTCAGTACGATTGCATCCCAAGTGAGCCTCCTCTtgtaatagaagaaaataggCCTGATCCTTCTTGGCCATCTAGGGGAGAAGTTCATGTTCATGATTTGCAGGTGCGTTATGCAACACACCTGCCATTAGTGTTGCGTGGTCTGACGTGCACATTTCTTGGAGGATTGAAAACTGGGATTGTTGGGAGAACAGGAAGCGGTAAATCAACTCTCATACAAACGCTTTTCAGAATCATTGAGCCTACTGCCGGGGAAATCATGATTGACAGCATTAACATCTCTTCAATTGGGCTGCATGATCTGAGGTCCAGACTAAGCATTATTCCTCAGGATCCAACCATGTTTGAAGGCACTGTGAGAAGTAATTTGGATCCACTGGAAGAGTACACAGATGAACAAATTTGGGAGGCTTTGGATAAGTGTCAGCTTGGGGATGAAGtcaggaagaaagaagaaaagctgAGCTCTTCAGATTCAATTTCACCGTCAAAagttacaacaaaaaaaaaaagtgacgaGAGGGCTTCACACTTGTATAGCTTGTATTACAAGTTAGATAGCATAGGGAGTTATGTAAAAATGGGTGCTTCAGTTACTGAGAATGGGGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTGTGCCTTGGCAGGGTGCTGCTCAAGAAGAGTAAGGTCTTGGTGCTTGACGAAGCCACTGCATCAGTTGATACTGCTACAGATAATTTGATTCAGCAAACTCTTAGGCAGCACTTCTCTGACTGCACAGTCATTGTAATTGCTCATAGGATAACTTCTGTTCTTGACAGTGATATGGTTCTGCTTCTCAACCAAGGACTTATTGAAGAGAATGACTCTCCAGGAAAATTGTTGGAGAACAAGTCATCATCTTTTGCTCAACTGGTTGCTGAATATACTATGAGGTCTAATTCCACTTTCTG 4574 0.3931 MKLLFSLTLQMLSFTDLLILKPIFLHAFTGFLHLVLLATFFVLWVCKKIIVNDREDPEKKFKNSLPKKTLFCSLGVSGFNLILCLFNYFYFKNDGWSEESIVTLLDLTIRTVVWAAIYVYLRARFNSYGEKRFPLFFRIWCGFYFVFCSYCLIVDIILYVRQVSFPVQYIISDVVSVFVGLFFCYVGIFVKNEEEDNILVEPLLNDDANVSTKGSETVTPYSNAGIFSILTFSWMNRLIAVGNKKVLDLNDVPQLASRDSVFGAFPIFRDKLEANCGTISRVTTIKLVKLLFFYAWKDILLTVFLSTLYTAASYVGPYLIDTLAQYLNGERKFKNEGYLLVFAFSAAKLTESLTMRQWVFRFFQVGGRIRGLLVTVIYNKSLTLSCQSRQSHTTGEMINLMAVDAERVGNFSWRLVDMWAVLLHLVFAFLILYGNLGLASIAAFVATVILMLGNIPLGKLQEKFQGKLMDSKDTRMKATSEILRNMRILKLQGWEMKFLSKITELRKSEEGWLKKYVYTSALTTFAFGVAPTFVSVVTFGTCILIGVPLDLGKILSALATFGLLGAPIYSLPHTIAALVQAKVSLDRISSFLHLDEVQSDAIEKLPRGSSDKAIEVIVGNFSWDLSSSNMTLKSINLCVSHGMRVAVCGTVGSGKSSLLSCILGEIPKVSGTLKVCGTKAYVAQSPWIQSGKIEENILFGKEMDREMYDKVLEACSLKKDLEDLPLGDQTMIGERGINLSGGQKQRIQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGILSSKSVVYVTHQVEFLPSADLILVMKDGKVTQCGKYYDLFNSGTDFMELVGAHKKALSALDSLDGGKISNPEQEVNVNGAERVEENEERKNIKDSRVDDIVEQKGQLVQEEEREKGKVGFPIYWKYIRTAYGGALVPFILLGQILFQILQIGSNYWLAWASPTSPEVKPAVGLSTLTLVYVALAVGSSFCILARETLVVTAGFRTATLLFNKMHFCIFRAPMSFFDATPSGRILNRASTDQTAVDISIPYTIEEFVFSMVQLLGIIAVMSQIAWQVFIIFIPVVAISIWYQQYYLPCARELQRLVGVCKAPVIQHFSETISGVTTIKSFDQEARFQGTNMKLTDGYARPRFHVSGAMEWLCFRMDMLSSIIFVFSLIFLISIPEGVVDPGIAGLAITYGLNLNMVQAMMIWNLCSMENSIISVERILQYDCIPSEPPLVIEENRPDPSWPSRGEVHVHDLQVRYATHLPLVLRGLTCTFLGGLKTGIVGRTGSGKSTLIQTLFRIIEPTAGEIMIDSINISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKEEKLSSSVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVIVIAHRITSVLDSDMVLLLNQGLIEENDSPGKLLENKSSSFAQLVAEYTMRSNSTF 1484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01208 1484 CDD ABCC_MRP_domain1 614 814 - -
Bva02g01208 1484 CDD ABC_6TM_ABCC_D1 301 588 IPR044746 GO:0140359
Bva02g01208 1484 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 616 837 IPR003439 GO:0005524
Bva02g01208 1484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 836 IPR027417 -
Bva02g01208 1484 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1240 1474 IPR003439 GO:0005524
Bva02g01208 1484 Gene3D ABC transporter type 1, transmembrane domain 279 599 IPR036640 GO:0005524|GO:0016021
Bva02g01208 1484 SMART AAA_5 1266 1451 IPR003593 -
Bva02g01208 1484 SMART AAA_5 641 814 IPR003593 -
Bva02g01208 1484 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 103 1484 - -
Bva02g01208 1484 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 103 1484 - -
Bva02g01208 1484 SUPERFAMILY ABC transporter transmembrane region 288 588 IPR036640 GO:0005524|GO:0016021
Bva02g01208 1484 SUPERFAMILY ABC transporter transmembrane region 921 1222 IPR036640 GO:0005524|GO:0016021
Bva02g01208 1484 CDD ABCC_MRP_domain2 1238 1458 - -
Bva02g01208 1484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1231 1471 IPR027417 -
Bva02g01208 1484 CDD ABC_6TM_ABCC_D2 921 1214 IPR044726 GO:0140359
Bva02g01208 1484 Pfam ABC transporter 632 766 IPR003439 GO:0005524
Bva02g01208 1484 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 300 580 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g01208 1484 Pfam ABC transporter transmembrane region 300 564 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g01208 1484 Pfam ABC transporter transmembrane region 932 1165 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g01208 1484 ProSitePatterns ABC transporters family signature. 739 753 IPR017871 GO:0005524
Bva02g01208 1484 Pfam ABC transporter 1259 1405 IPR003439 GO:0005524
Bva02g01208 1484 Gene3D - 609 842 IPR027417 -
Bva02g01208 1484 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 923 1203 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g01208 1484 Gene3D - 1223 1476 IPR027417 -
Bva02g01208 1484 Gene3D ABC transporter type 1, transmembrane domain 885 1220 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01208 Bva-Chr2 16301481 16308395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01208 620 843 Calmodulin-binding Proteins AT2G36910 30.738 2.22e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01208 - K05666 gmx:100777836 2184.45