Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01191 ATGTCCACTATCCcaattaaagataaagattCTTATTTCCTCCCCTCCCTGCTGTGTTCGACTTCAGCATCAACTCCTCCTCATCATCACCCGTCCTCTACACTAGTCTTTATCCTCCATATCTCTCGTCAGATGGATAGGCATTGGCcgcttttgtctttttttggGAGTGTTGTTGGATTCTACTTGTTGCTAATTAGGAATCCAGATATCAAGATTGGTGCACAGGAGCAAACATGGGCAGGATGCGAAGTTGGTGTTGGCTGGACAGGAAGGAACAAGTGTCTAGTGAAACGCAAATATATCCCATACCTAGACAACTCACgGTTTGAATGCATTATAATAGCAAGAGAGAATTGCTTCGGAATACCCAGCACCCAGAGTTTGAagctcataaatatttttccaaatCTACCATCGCCACCGCTCATTCTTAATAGCTGGGCGGGATGGAAAGCTGATGTTGGCCAGAGAGGGAGTAGCAAGCATATGGTTAAAGAAGGGGAATATAACACCACCTTAGACAAATCACAATTAACAAGCAGCAGTAACGTGTCAGATTCTGTCGAGTCTCTACAAGATGGCGAGAGTGGTTTTAGATCTGAGAATGCTTTAATGGCTGCTAATACTAATCAAATTGAGGCTGAATGGATTGAACAATATGAACCTGGTGTGTATATAACACTTGTAAACTGCGAGGATGGTACTAGAGATATAAAACGAGTGCGTTTCAGCCGGAAAATATTTCAAGAGCACCAAGCAGAGACTTGGTGGTCGGAGAATCGGCTGAAGGTATACGAAATGTATGATATTAGGAGCACCAATAAGTCTTCTGGCCAAGCGGCGGGAAGGGCAGAGGGTGCTGCTTCACCTGTTTCCCGAGCTTTAATTGCAGCTAATACTAATCAACTTGAGACTGAATGGATTGAACAATATGAACCTGGTGTGTATGTAACAATTGTAAACTTCAAGGATGGTACCAGAGATCTAAAACGAGTGCGCTTTAGCCGGAGAAGATTTCAAGAGCACCAAGCAGAGACTTGGTGGTCGGAGAACCGAGAGAAGGTATACAAAAAGTTTGATGTTCATATCACCTACACGGCTTCTGAACAAGCGGCGGAAAGGGGAAGAGGGCGATGTTTCACCTGTTTCCCAAGCTCAAGGGAAATAGATAGTGAATG 1181 0.4234 MSTIPIKDKDSYFLPSLLCSTSASTPPHHHPSSTLVFILHISRQMDRHWPLLSFFGSVVGFYLLLIRNPDIKIGAQEQTWAGCEVGVGWTGRNKCLVKRKYIPYLDNSRFECIIIARENCFGIPSTQSLKLINIFPNLPSPPLILNSWAGWKADVGQRGSSKHMVKEGEYNTTLDKSQLTSSSNVSDSVESLQDGESGFRSENALMAANTNQIEAEWIEQYEPGVYITLVNCEDGTRDIKRVRFSRKIFQEHQAETWWSENRLKVYEMYDIRSTNKSSGQAAGRAEGAASPVSRALIAANTNQLETEWIEQYEPGVYVTIVNFKDGTRDLKRVRFSRRRFQEHQAETWWSENREKVYKKFDVHITYTASEQAAERGRGRCFTCFPSSREIDSE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01191 393 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 291 368 - -
Bva02g01191 393 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN 165 275 - -
Bva02g01191 393 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 165 275 - -
Bva02g01191 393 Pfam Transcription factor regulating root and shoot growth via Pin3 214 269 IPR013591 -
Bva02g01191 393 Pfam Transcription factor regulating root and shoot growth via Pin3 305 360 IPR013591 -
Bva02g01191 393 MobiDBLite consensus disorder prediction 176 195 - -
Bva02g01191 393 ProSiteProfiles BRX domain profile. 306 361 IPR013591 -
Bva02g01191 393 ProSiteProfiles BRX domain profile. 215 270 IPR013591 -
Bva02g01191 393 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN 291 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01191 Bva-Chr2 16160843 16167571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01191 307 363 Major Intrinsic Protein MIP AT1G31880 45.614 1.02e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01191 - - oeu:111382518 191.815