Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01133 ATGGCACACTTTGAAACCACATTAGGTATATCTCACTTCTTGATTCTTATGAGTGTCAATGTTGGTGCCTTTATATTGTTCATTATACTATGGGAATTCTCATGGATTTGCATGAGGGATGTGGATTTTACTTCTGCCTGCTTTCAGAGGAGTGTAATAGACATTGTAGATGTTCTATTCCTCTGTATTTTCTACTTGTCTTTGATTATCAGTTTTATCAGAAGAAACTCAGCAACCATTGGTCATAGAAGGGGATGGGTTTCCACAGTTGTATCAATCTGTTGTGCTCTTATTGGCATTGCGTATTTGAGTAATGGGTTGTGGAAACTCACAGCCAAAACTGAAGACTTTAACTGGCTGGGCTGGTTGGTTTACATAATCAGAGGACTCGTTTGGGTTTCCTTAGCATTTTCTTTGCTTGTACAGAGGTCAAAATGGATAAAAGTTCTAAACTCTGTTTGGTGGGTTACTTCCTGCGTATTGGTTTCTGCTTTCAATAtagaaattctttttaaaggCCATAAAGTTCAAGTATTTGATATCGTCCAATGGCCTGTACAcattttacttgttttctgTGTCTTCCAAAACCTTGGTTACTTTGTACGAAAACACATCCCAGAAGCCAGTTTATCTGAACCCCTATTAGCTCATAAGgatgaaaataaacaatcGAGACTAGCCTTTGCCACCATTCTTAGCAAATTAACTTTCTCTTGGATAAATCCTTTACTCAGTTTGGGTTACTCGAAGCCACTAGCTCTTGAAGACATCCCTTCTCTTGTTTCAGAAGACGAAGCTGACTTAGCTTACAAAAAGTTTGCCAATCAATGGGATTTGCTTTTAAGAGAGAGGGGCAGGAACAACAGTAAAAACTTGGTTCTCTGGTCAGTAGTTAGAGTtcacttaaaagaaaacattttcataGCAATTTGTGCACTTCTCAGAACTGTTTCTGTTGTAGTTTCTCCTTTGCTTCTCTATGCTTTTGTGAACTATTCAAATCGCAATGAGCAAGACCTGAAGGAAGGTCTTTCCCTACTTGGCTGTCTGATTCTTGTCAAGGTGGTCGAGTCTTTGTCTCAGAGGCACTGGTTTTTTGGTTCAAGAAGGTCTGGAATGAAAATGAGATCCGCTTTAATGGTAGCGGTCTATCAGAAGCAGTTAAAGCTTTCAAGTTTGGCTAGGAGAAGGCATTCAACTGGGGAAATTGTGAATTACATTGCAGTTGATGCATATCGAATGGGAGAATGGCCGTGGTGGTTCCACACAACATGGACAAACGCACTCCAACTCTTTCTAGCTGTATGTGTCCTTTTTGGTATCGTGGGTCTAGGTGCTCTTCCAGGTTTAGTCCTTCTATGTATCTGTGGGTTTCTCAATGTACCATTTGCAAAGATCTTGCAGAAATGTCAGACAGAATTTATGATTGCACAAGATGATCGTCTAAGATCAACTTCAGAGATCCTGAATagcatgaaaattataaagttgCAATCATGGGAGGATAAATTCAAGAGCTTGGTTGAGTCCCTACGTACTAGAGAGTTCAAATGGCTAGCTGAGTCACAGTTGAAGAAAGCTATTGGCTCATTCTTTTATTGGATGTCGCCTACTGTCATTTCTTCAGTCATTTTCCTAGGATGTGTCATCTTCAGGAGTGTTCCATTGAATGCAGGAACCATCTTCGCAGTTCTTGCCACACTGAGGAGCATGTCAGAACCTGTTAGAACGATACCTGAAGCACTTTCAATTATGATCCAAGTACAAGTCTCTTTTGATCGTCTCAACACCTTTCTGCTTGATGATGATCTAAAGAATGATGATGTCAGAAGAAACTCAAAGCACAACTCAGTTAACGTTGTCAAAATTCAAGAAGGTAACTTCAGTAGGGATCAGGAATCAGTGTCTCCAACTCTACGAGATGTGAATTTAGAAATCAAATGGGGCCAGAAAATTGCAGTTTGCGGACCAGTTGGAGCTGGAAAATCATCTCTGTTATATGCAATACTTGGAGAGATACCAAAAATATCAGGAACGGTTAATGTAGGTGGAACTCTTGCCTATGTTTCTCAATCTTCTTGGATCCAAAGTGGGACGGTTCGTGAGAATATACTATTTGGAAAGACAATGGATAAAACCAGATATGAAAATGCAATTAAAGTTTGTGCCTTGGATAAGGATATTAATGGTTTTAGATATGTTGACCTCACAGAAATTGGTCAGAGAGGGATAAACATGAGTGGAGGACAAAAACAAAGGATTCAACTAGCTCGAGCAGTCTACAATGATGCAGATATATATCTCCTTGATGACCCTTTCAGTGCAGTGGATGCACATACTGCTGCTATTCTCTTCAATGACTGTGTCATGACTGCtctaagaaagaaaacagtcATTCTAGTGACTCATCAAGTAGAGTTTCTCTCAGAAGTTGATAAAATCCTGGTAATGGAGGGAGGAAAAATTACTCAGTCAGGTAGTTATAAGGATCTATTGAAGGCTGGGACAGCCTTTGAACAACTTGTGAATGCTCATAGAGAGGCAGTCACAGGGCTggatcaaaacaaagaaaaccaagGGGAATCTCAAAATGTTACAATTAAGCCTGAGGAGTCTCAGAGTTTTCATCTCACTAAGGATAAGAGTGAGGAGGAGATTTCCATTAAGGGTTACCCCGGGGCACAACTcacacaagaagaagaaaaggagattGGTGATGTTGGATGGAAGCCATTCTGGGAGTATATTATTGGTTCCAAGGGATCACTGCTTCTATGTTCGATGTTACTAACACAAGCGGCTTTTGTAGCTTTACAGGCAGCAGCTACTTTTTGGCTTGCTATAGCCACTGAAATGCCAAAAGTAACTAGTTTCATTTTGATTGGAGTTTACACAGTGATTTCATCTCTTAGTGCTGTCTTTGTATATCTAAGGTCTTTCGTTGGCGCCCATCTTGGACTAAAAGCTTCTAAGGCCTTCTTTTCTGGTTTCACTAATGCTATCTTCAATGCTCCTATGTTGTTCTTTGACTCAACCCCTGTAGGGCGGATTTTGACCCGAGCTTCATCAGATTTGAgtattttggattttgatatACCTTTCTCCATCGTCTTTGTAGTTGCAGCAGGAATTGAACTTGTGTCCATTATTGGTATAATGGTTTTAGTTACTTGGGAAGTTATCATTGTTGCTGTGTTCGCTGTAGTGGCTTCAAATTACATTCAGGGCTATTATCAAGCCTCTGCAAGGGAACTAATAAGGATTAATGGAACAACGAAAGCTCCAGTTATGAATTTTACGGCTGAGACATCGCTCGGAGTGGTGACTATAAGAGCTTTCGAGATGGTAGAGAGATTTTTCCATAACTACCTGAAGCTGGTGGACACAGATGCAAAAATGTTCTTCCATTCCAATGCTGTCATGGAATGGTTACTTCTAAGGATTGAAGTACTTCAGAATTTGACTCTCTTCACTGTGGCTGGACTATTTGTTATACTTCCAAATGGATACATATCTCCTGGCCTTGTGGGACTTTCTCTGTCTTATGCTTTGACACTAACAGGAGCCCAAGTTTTTCTGACACGATGGTTTTGCAACTTATCAAACTATATCATTTCTGTTGAACGGATCAAACAATTCATCCACATACCAGCAGAGCCTCCTGCAATTGTGGAGGACAATAGGCCACCATCTTCATGGCCTTTCAGGGGCAGGATAGAACTGAAAGCCCTCCAGATAAGATATCGTCCAAATGCTCAAATAGTACTTAATGAAATCACTTGTACTTTCAAAGAAGGGAACCGAGTAGGAGTTGTAGGAAGGACTGGAAGTGGGAAAACTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTGCAGCTGGCGAGATCCTTATTGATGGCATTAACATATGTTCAATTGGGCTGAAAGATTTGAGGATGAAGCTAAGCATCATACCTCAAGAACCAACTCTTTTCAAAGGTAGCATTAGAACTAACTTGGACCCTCTTGGCCTGTACTCTGATGATGAAATATGGAAGGCCTTAGAGAAATGCCAGCTTAAAGCAACAATCGCAAGACTACCAAATCTCTTGAACTCATTTGTGAGTGATGAAGGTGAAAATTGGAGCATGGGACAGCGGCAACTCTTTTGTCTTGGAAGAGTGCTTCTTAAGAGGAACAGAATTCTTGTTTTGGATGAAGCTACTGCTTCCATTGATTCTGCCACAGATGCTATTCTACAGCGAGTTATTAGACAGGAATTTGAACAATGCACAGTGATAACAGTGGCTCACAGAGTTCCAACAGTGATAGACAGTGACATGGTCTTGGTCCTCTCTTATGGGAACCTGGTCGAATATGATAAGCCCTCAAAGCTTCTGGAGACCAACTCTTCATTCTCTAAGCTTGTAACTGAATACTGGGCCAGCAGCAGTAGAAGTTCCTCCCAAAATACATA 4463 0.3935 MAHFETTLGEFSWICMRDVDFTSACFQRSVIDIVDVLFLCIFYLSLIISFIRRNSATIGHRRGWVSTVVSICCALIGIAYLSNGLWKLTAKTEDFNWLGWLVYIIRGLVWVSLAFSLLVQRSKWIKVLNSVWWVTSCVLVSAFNIEILFKGHKVQVFDIVQWPVHILLVFCVFQNLGYFVRKHIPEASLSEPLLAHKDENKQSRLAFATILSKLTFSWINPLLSLGYSKPLALEDIPSLVSEDEADLAYKKFANQWDLLLRERGRNNSKNLVLWSVVRVHLKENIFIAICALLRTVSVVVSPLLLYAFVNYSNRNEQDLKEGLSLLGCLILVKVVESLSQRHWFFGSRRSGMKMRSALMVAVYQKQLKLSSLARRRHSTGEIVNYIAVDAYRMGEWPWWFHTTWTNALQLFLAVCVLFGIVGLGALPGLVLLCICGFLNVPFAKILQKCQTEFMIAQDDRLRSTSEILNSMKIIKLQSWEDKFKSLVESLRTREFKWLAESQLKKAIGSFFYWMSPTVISSVIFLGCVIFRSVPLNAGTIFAVLATLRSMSEPVRTIPEALSIMIQVQVSFDRLNTFLLDDDLKNDDVRRNSKHNSVNVVKIQEGNFSRDQESVSPTLRDVNLEIKWGQKIAVCGPVGAGKSSLLYAILGEIPKISGTVNVGGTLAYVSQSSWIQSGTVRENILFGKTMDKTRYENAIKVCALDKDINGFRYVDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRKKTVILVTHQVEFLSEVDKILVMEGGKITQSGSYKDLLKAGTAFEQLVNAHREAVTGLDQNKENQGESQNVTIKPEESQSFHLTKDKSEEEISIKGYPGAQLTQEEEKEIGDVGWKPFWEYIIGSKGSLLLCSMLLTQAAFVALQAAATFWLAIATEMPKVTSFILIGVYTVISSLSAVFVYLRSFVGAHLGLKASKAFFSGFTNAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPFSIVFVVAAGIELVSIIGIMVLVTWEVIIVAVFAVVASNYIQGYYQASARELIRINGTTKAPVMNFTAETSLGVVTIRAFEMVERFFHNYLKLVDTDAKMFFHSNAVMEWLLLRIEVLQNLTLFTVAGLFVILPNGYISPGLVGLSLSYALTLTGAQVFLTRWFCNLSNYIISVERIKQFIHIPAEPPAIVEDNRPPSSWPFRGRIELKALQIRYRPNAQIVLNEITCTFKEGNRVGVVGRTGSGKTTLISALFRLVEPAAGEILIDGINICSIGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKALEKCQLKATIARLPNLLNSFVSDEGENWSMGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRQEFEQCTVITVAHRVPTVIDSDMVLVLSYGNLVEYDKPSKLLETNSSFSKLVTEYWASSSRSSSQNT 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01133 1465 Gene3D - 1201 1452 IPR027417 -
Bva02g01133 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1220 1452 IPR003439 GO:0005524
Bva02g01133 1465 Gene3D - 608 853 IPR027417 -
Bva02g01133 1465 Pfam ABC transporter transmembrane region 285 548 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g01133 1465 Pfam ABC transporter transmembrane region 938 1168 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g01133 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 823 IPR027417 -
Bva02g01133 1465 CDD ABC_6TM_ABCC_D1 286 574 IPR044746 GO:0140359
Bva02g01133 1465 CDD ABC_6TM_ABCC_D2 900 1193 IPR044726 GO:0140359
Bva02g01133 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 602 823 IPR003439 GO:0005524
Bva02g01133 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1207 1451 IPR027417 -
Bva02g01133 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 907 1181 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g01133 1465 Gene3D ABC transporter type 1, transmembrane domain 867 1199 IPR036640 GO:0005524|GO:0016021
Bva02g01133 1465 Gene3D ABC transporter type 1, transmembrane domain 261 585 IPR036640 GO:0005524|GO:0016021
Bva02g01133 1465 CDD ABCC_MRP_domain1 600 800 - -
Bva02g01133 1465 SUPERFAMILY ABC transporter transmembrane region 889 1200 IPR036640 GO:0005524|GO:0016021
Bva02g01133 1465 Pfam ABC transporter 618 752 IPR003439 GO:0005524
Bva02g01133 1465 Pfam ABC transporter 1235 1383 IPR003439 GO:0005524
Bva02g01133 1465 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 50 1462 - -
Bva02g01133 1465 SUPERFAMILY ABC transporter transmembrane region 273 580 IPR036640 GO:0005524|GO:0016021
Bva02g01133 1465 SMART AAA_5 1244 1437 IPR003593 -
Bva02g01133 1465 SMART AAA_5 627 800 IPR003593 -
Bva02g01133 1465 ProSitePatterns ABC transporters family signature. 725 739 IPR017871 GO:0005524
Bva02g01133 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 285 566 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g01133 1465 CDD ABCC_MRP_domain2 1216 1436 - -
Bva02g01133 1465 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 50 1462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01133 Bva-Chr2 15526683 15533427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01133 600 812 Calmodulin-binding Proteins AT2G36910 30.396 6.10e-21 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01133 - - gmx:100790301 2133.22