Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01125 ATGGGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGGAAGAAGAAGGCCTGGAGGAAGAAGCGAAAGTACGAGCTTGGTCGTCAGCCAGCCAACACTAAGCTATCAAGCAATAAGACAGTCAGGAGAGTTCGCGTTAGAGGAGGAAACGTGAAATGGAGAGCCTTGAGATTGGATACCGGCAACTACTCATGGGGTAGTGAAGCAGTGACCCGGAAAACTCGTATCCTTGATGTGGTTTACAACGCATCAAACAACGAGCTTGTGCGAACTCAGACCCTGGTGAAGAGTGCTATTGTTCAGGTGGATGCTGCTCCATTTAAGCAGTGGTACCTTCAGCATTATGGGGTTGATATTggtaggaaaaagaaaacagccTCGAAGAAGGACTCTACAGAGGAGGGTGAAGCTCCTgcagaagaaacaaagaagagtAACCATGTGCAGAGAAAATTGGAGAAGCGTCAGAAAGACCGCAAGCTTGACCCCCACATTGAAGAGCAGTTCGGCGGTGGCCGGTTGCTGGCTTGCATTTCTTCTCGCCCCGGTCAGTGTGGCAGAGCTGACGGGTACATATTGGAAGGTAAGGAGCTTGAGTTTTACATGAAGAAAATCCAGAGGAAGAAGGGAAAGGGCGCTGGTGCTGCTTG 659 0.4734 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTASKKDSTEEGEAPAEETKKSNHVQRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01125 219 Gene3D - 24 212 - -
Bva02g01125 219 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Bva02g01125 219 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Bva02g01125 219 Gene3D Ribosomal protein S8e, subdomain 108 175 IPR042563 -
Bva02g01125 219 MobiDBLite consensus disorder prediction 1 41 - -
Bva02g01125 219 MobiDBLite consensus disorder prediction 126 168 - -
Bva02g01125 219 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Bva02g01125 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 216 IPR001047 GO:0003735|GO:0005840|GO:0006412
Bva02g01125 219 MobiDBLite consensus disorder prediction 11 26 - -
Bva02g01125 219 CDD Ribosomal_S8e_like 5 196 - -
Bva02g01125 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01125 Bva-Chr2 15479276 15481405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01125 1 219 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.000 1.79e-128 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01125 K02995 - tcc:18612677 409.068