Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01123 ATGGAAAACGAATTCTTTCTGAATGCAGGGATTCCCCATCCCCTGCACTTTGAGCCTTCGACTTCTTCTTCAATGCCCACTTGGCAATCACTCTCCTCTCCGATGGTTATGAATAGTTCCGAGCAGACCCAGGATTGTTTCTACAACCCCACATGGGAAAAGTCAACGGATCATGCTATGCAATTTGATTCTGCTCTGAGCTCAATGGTTTCTTCGCCGGCGGCGTCAAATTCTAATGTCTCTACCGAGAATTTTGTTATCGGAGAATTGATCGGAAAACTGGGAAACATTGGCAGCTCCGGCGAGATCTCGCCGCCGTTAATTGCAGCATCTTCTTACATGAAAGGAAATAATAGCACTAATACTTCTTGTTATAGCACACCTTTGAGTTCTCCTCCAAAAATGAGCATTCCCCAAGTGATGAACCAGAAATTTCCCAGCTTGGGGAAATCAATGGCTTTGAATTCCACTGTGGCAGATTTCTCAGCTGACCCTGGATTTGCAGAGAGGGCTGCAAAGTTTTCTTGCTTTGGCAGCAGAAGCTTCAATGACAGAACAAGCCTATTTGTGATGAACAAGAACAATGGTGAATTCTGTCAGAGTCAGAGATCTACGTCAACTCCATTGATGGAAAATGGCAAGCTTTCTCGGGTTTCGAGTAGTCCTTCACTCAAGGCACTAGGATCTCAAATGGGTAATCACGAAAACAAGAATTCTCCAATGGAATTGGCAAATTCTCAAGAGGAATCTACACTCTCTGAGCAAACTCCAAATGGGAAGCCTTCCCCTGAAATGAATtccaggaaaagaaaagcaccCTCCAAGGGAAAAGTCAAGGACACTTCAAACTCAACCAACCCTCCAAAGGCCCTTGAAGCTAATGAGGACTCGAATTCGAAGCGAAGCAAGCCTAGTGAAGGTGAAGGCGATGAAAATGGGTCTGCGAAAGCAGAGGAAGAGTCAAAAGGAGGCAATAGCAATGcaggagaagagaaacaaacaaagagtAACTCAAAGCCTCCTGAACCTCCAAAAGATTATATTCATGTCAGAGCAAGAAGAGGCCAAGCCACTGATAGCCATAGCCTTGCCGAAAGGGTAAGAAGGGAGAAAATCAGTGAAAGAAtgaaacttctccaagatCTTGTCCCAGGATGCAATAAGGTCACTGGAAAAGCTCTTATGCTAGATGAGATTATAAACTATGTGCAGTCATTGCAGAGACAAGTTGAGTTCCTGTCTATGAAATTGGCCTCTGTGAACACCAGGCTGGATTTTAGTGTTGAAAGTCTAATCTCAAAAGATATATTTCAATCAAACAATTCTTTGGCACACCCAATATTCCCTCCCTTAGATTCCTCAGCACCATCCTATTATGGGCATCAGCCTCAGCCAAACCCAGCTATTGGCACTATGACCCACAACACAGGGGACCCATTATCAGATGCTGCTGCACTTTGCCAAAATCTTGGCATGCAGCTACCTCCACTAAATGGGTTCAATGAAGTTGCTCCTCAGtaTCCAATAGCATTTTCTGAAGATGATCTCAACACCATTGTTCAAATGGGGTTTGGCCAAACTGCAAATAGGAAATCACCAACACAGTCTTCAAGTTTTAATGGAGGCACAAATCATATGAAAGTTGAGCTCTA 1652 0.4231 MENEFFLNAGIPHPLHFEPSTSSSMPTWQSLSSPMVMNSSEQTQDCFYNPTWEKSTDHAMQFDSALSSMVSSPAASNSNVSTENFVIGELIGKLGNIGSSGEISPPLIAASSYMKGNNSTNTSCYSTPLSSPPKMSIPQVMNQKFPSLGKSMALNSTVADFSADPGFAERAAKFSCFGSRSFNDRTSLFVMNKNNGEFCQSQRSTSTPLMENGKLSRVSSSPSLKALGSQMGNHENKNSPMELANSQEESTLSEQTPNGKPSPEMNSRKRKAPSKGKVKDTSNSTNPPKALEANEDSNSKRSKPSEGEGDENGSAKAEEESKGGNSNAGEEKQTKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSVESLISKDIFQSNNSLAHPIFPPLDSSAPSYYGHQPQPNPAIGTMTHNTGDPLSDAAALCQNLGMQLPPLNGFNEVAPQYPIAFSEDDLNTIVQMGFGQTANRKSPTQSSSFNGGTNHMKVEL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01123 550 Pfam Helix-loop-helix DNA-binding domain 360 407 IPR011598 GO:0046983
Bva02g01123 550 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 543 IPR024097 GO:0006355
Bva02g01123 550 Gene3D - 353 428 IPR036638 GO:0046983
Bva02g01123 550 Coils Coil 403 423 - -
Bva02g01123 550 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 425 IPR036638 GO:0046983
Bva02g01123 550 SMART finulus 362 412 IPR011598 GO:0046983
Bva02g01123 550 MobiDBLite consensus disorder prediction 527 544 - -
Bva02g01123 550 MobiDBLite consensus disorder prediction 198 347 - -
Bva02g01123 550 MobiDBLite consensus disorder prediction 198 263 - -
Bva02g01123 550 PANTHER BHLH TRANSCRIPTION FACTOR 2 543 - -
Bva02g01123 550 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 356 406 IPR011598 GO:0046983
Bva02g01123 550 MobiDBLite consensus disorder prediction 527 550 - -
Bva02g01123 550 MobiDBLite consensus disorder prediction 278 293 - -
Bva02g01123 550 CDD bHLH_AtBPE_like 346 431 - -
Bva02g01123 550 MobiDBLite consensus disorder prediction 294 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01123 Bva-Chr2 15457327 15460324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01123 1 513 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 45.920 1.14e-114 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva02g01123 HLH 4.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01123 - - gmx:100812081 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00359 01 3088495 3091516 Bva02g01123 02 15457327 15460324 BWGD