LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva02g01118	ATGGAAGAACTCTTCCGCCGTGAACCGCCAATAGTTCCCGCCTTGGATTTTGAAACCAtcaggccaatctccgccgtGGGGCGCGGCGCCAAGGGCGTAGTCTTCCTTGCCAAAGACGAGTCGCGTGATGAGAATGGGATTTTTGCTCTCAAAGTGATCTCCAAAGATCTGCTTCAGAAGAATGCGAAGGCAGTTAAAAATGATGGATTCGGCGAGTGCAAGAGGGTTTTGTTCGAGCAACAAGTACTGAGTCGTTTTGATCACCCCTTTTTGCCCAGATTGCGAGGGGTTTTGGAAACCGAGAAGATCATCGCCTATGCTATTCCCTATTGCTCCGGAGGGAACCTCCATTCTGTCAGAAAAAGGCAATCCGAGCAAATGTTCTCCGATGATAGCATCAGGTTTTACGCCGTGGAATTGGTCCTTGCATTGGAATATTTGCACAGTTTGGGAATAGTGTACCGTGATTTGAAGCCGGATAACATAATGATCCAAGATAACGGTCACATAATGCTCGTCGATTTCGATCTTTCCAAAAAGCTGAACCCTAAGTCTCCACGATCGGTGAGTTGCAACTCGTCCCCGAGTTCTGACCCGGTGACATTTAGGAGGAAGAGACGGATTTCGCGGTTCTACAGTTTCTGCTCCTCGGGCATTAGGCCGTCTGACTCGGAATTTGAACCAGATAACTCGTCAGGGACTGAGTCGGACTCGGTGGAGAAGTCCAACTCGTTCGTCGGAACAGAGGAGTATGTTTCGCCGGAGGTGATATCAGGAAACGGCCACGATTTCAGCGTTGATTGGTGGTCACTCGGCGTCGTTTTGTACGAGATGCTCTACGGAAAGACGCCGTTTAAGGGAGAGAATAGGAAGGAGACGTTTTATCGGGTTTTAACGAAGACGCCTGAACTCACGGGAGAGAAAACGGCGTTAAGGGATTTGATTGGGAAATTGTTGGAAAAAGATCCCAACCGCCGGATTGGACTGGAGGAAATCAAGGGCCATGATTTCTTCAGAGGGTTTAACTGGGACATGGTTTTAGAAATATCACGGGCACCGTTTATTCCTGAAACTGAGGCTCGGGATACAGATGGgattaagaaaattgatgtGGAGTCGTTTGTCCATGGAATATTCTTTGAGAAAGAtgaggagaaaaataaagtggcGGATGATAAAAAGGGTGAAGAAAATGTAGACAATAAGGGGGTATGGGTTGAGAAACTGAGCCACCGGACTCAGCACCCCATTGACactgaaaattttttgattttttg	1277	0.4526	MEELFRREPPIVPALDFETIRPISAVGRGAKGVVFLAKDESRDENGIFALKVISKDLLQKNAKAVKNDGFGECKRVLFEQQVLSRFDHPFLPRLRGVLETEKIIAYAIPYCSGGNLHSVRKRQSEQMFSDDSIRFYAVELVLALEYLHSLGIVYRDLKPDNIMIQDNGHIMLVDFDLSKKLNPKSPRSVSCNSSPSSDPVTFRRKRRISRFYSFCSSGIRPSDSEFEPDNSSGTESDSVEKSNSFVGTEEYVSPEVISGNGHDFSVDWWSLGVVLYEMLYGKTPFKGENRKETFYRVLTKTPELTGEKTALRDLIGKLLEKDPNRRIGLEEIKGHDFFRGFNWDMVLEISRAPFIPETEARDTDGIKKIDVESFVHGIFFEKDEEKNKVADDKKGEENVDNKGVWVEKLSHRTQHPIDTENFLIF	425

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Bva02g01118	425	Gene3D	Phosphorylase Kinase; domain 1	23	114	-	-
Bva02g01118	425	PANTHER	SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN	13	398	-	-
Bva02g01118	425	Gene3D	Transferase(Phosphotransferase) domain 1	115	187	-	-
Bva02g01118	425	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	152	164	IPR008271	GO:0004672\|GO:0006468
Bva02g01118	425	SMART	serkin_6	20	338	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Bva02g01118	425	Gene3D	Transferase(Phosphotransferase) domain 1	237	357	-	-
Bva02g01118	425	MobiDBLite	consensus disorder prediction	223	244	-	-
Bva02g01118	425	PANTHER	FLIPPASE KINASE 1-RELATED	13	398	-	-
Bva02g01118	425	SUPERFAMILY	Protein kinase-like (PK-like)	22	363	IPR011009	-
Bva02g01118	425	ProSiteProfiles	Protein kinase domain profile.	20	338	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Showing 1 to 10 of 13 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva02g01118	Bva-Chr2	15399559	15401258	Wgd

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva02g01118	14	425	AGC Kinase Gene Family	AT3G25250	56.905	2.04e-158	452

Showing 1 to 1 of 1 entries

Previous1Next

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Bva02g01118		Pkinase	2.9e-33	CL0016

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva02g01118	K20714		-	gmx:100785773	506.908

Showing 1 to 1 of 1 entries

Previous1Next

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva01g00353	01	3044679	3048041	Bva02g01118	02	15399559	15401258	BWGD

Showing 1 to 1 of 1 entries

Previous1Next