Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01118 ATGGAAGAACTCTTCCGCCGTGAACCGCCAATAGTTCCCGCCTTGGATTTTGAAACCAtcaggccaatctccgccgtGGGGCGCGGCGCCAAGGGCGTAGTCTTCCTTGCCAAAGACGAGTCGCGTGATGAGAATGGGATTTTTGCTCTCAAAGTGATCTCCAAAGATCTGCTTCAGAAGAATGCGAAGGCAGTTAAAAATGATGGATTCGGCGAGTGCAAGAGGGTTTTGTTCGAGCAACAAGTACTGAGTCGTTTTGATCACCCCTTTTTGCCCAGATTGCGAGGGGTTTTGGAAACCGAGAAGATCATCGCCTATGCTATTCCCTATTGCTCCGGAGGGAACCTCCATTCTGTCAGAAAAAGGCAATCCGAGCAAATGTTCTCCGATGATAGCATCAGGTTTTACGCCGTGGAATTGGTCCTTGCATTGGAATATTTGCACAGTTTGGGAATAGTGTACCGTGATTTGAAGCCGGATAACATAATGATCCAAGATAACGGTCACATAATGCTCGTCGATTTCGATCTTTCCAAAAAGCTGAACCCTAAGTCTCCACGATCGGTGAGTTGCAACTCGTCCCCGAGTTCTGACCCGGTGACATTTAGGAGGAAGAGACGGATTTCGCGGTTCTACAGTTTCTGCTCCTCGGGCATTAGGCCGTCTGACTCGGAATTTGAACCAGATAACTCGTCAGGGACTGAGTCGGACTCGGTGGAGAAGTCCAACTCGTTCGTCGGAACAGAGGAGTATGTTTCGCCGGAGGTGATATCAGGAAACGGCCACGATTTCAGCGTTGATTGGTGGTCACTCGGCGTCGTTTTGTACGAGATGCTCTACGGAAAGACGCCGTTTAAGGGAGAGAATAGGAAGGAGACGTTTTATCGGGTTTTAACGAAGACGCCTGAACTCACGGGAGAGAAAACGGCGTTAAGGGATTTGATTGGGAAATTGTTGGAAAAAGATCCCAACCGCCGGATTGGACTGGAGGAAATCAAGGGCCATGATTTCTTCAGAGGGTTTAACTGGGACATGGTTTTAGAAATATCACGGGCACCGTTTATTCCTGAAACTGAGGCTCGGGATACAGATGGgattaagaaaattgatgtGGAGTCGTTTGTCCATGGAATATTCTTTGAGAAAGAtgaggagaaaaataaagtggcGGATGATAAAAAGGGTGAAGAAAATGTAGACAATAAGGGGGTATGGGTTGAGAAACTGAGCCACCGGACTCAGCACCCCATTGACactgaaaattttttgattttttg 1277 0.4526 MEELFRREPPIVPALDFETIRPISAVGRGAKGVVFLAKDESRDENGIFALKVISKDLLQKNAKAVKNDGFGECKRVLFEQQVLSRFDHPFLPRLRGVLETEKIIAYAIPYCSGGNLHSVRKRQSEQMFSDDSIRFYAVELVLALEYLHSLGIVYRDLKPDNIMIQDNGHIMLVDFDLSKKLNPKSPRSVSCNSSPSSDPVTFRRKRRISRFYSFCSSGIRPSDSEFEPDNSSGTESDSVEKSNSFVGTEEYVSPEVISGNGHDFSVDWWSLGVVLYEMLYGKTPFKGENRKETFYRVLTKTPELTGEKTALRDLIGKLLEKDPNRRIGLEEIKGHDFFRGFNWDMVLEISRAPFIPETEARDTDGIKKIDVESFVHGIFFEKDEEKNKVADDKKGEENVDNKGVWVEKLSHRTQHPIDTENFLIF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01118 425 Gene3D Phosphorylase Kinase; domain 1 23 114 - -
Bva02g01118 425 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 13 398 - -
Bva02g01118 425 Gene3D Transferase(Phosphotransferase) domain 1 115 187 - -
Bva02g01118 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Bva02g01118 425 SMART serkin_6 20 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01118 425 Gene3D Transferase(Phosphotransferase) domain 1 237 357 - -
Bva02g01118 425 MobiDBLite consensus disorder prediction 223 244 - -
Bva02g01118 425 PANTHER FLIPPASE KINASE 1-RELATED 13 398 - -
Bva02g01118 425 SUPERFAMILY Protein kinase-like (PK-like) 22 363 IPR011009 -
Bva02g01118 425 ProSiteProfiles Protein kinase domain profile. 20 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01118 425 Pfam Protein kinase domain 239 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01118 425 Pfam Protein kinase domain 24 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01118 425 ProSiteProfiles AGC-kinase C-terminal domain profile. 339 425 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01118 Bva-Chr2 15399559 15401258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01118 14 425 AGC Kinase Gene Family AT3G25250 56.905 2.04e-158 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva02g01118 Pkinase 2.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01118 K20714 - gmx:100785773 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00353 01 3044679 3048041 Bva02g01118 02 15399559 15401258 BWGD