LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva02g01099	ATGGAGTTTCTATCTATCCTTGTAGATAAAGTGTTGGATATTGTGTTGAAACCAGCTCAACGAGAACTCGGTTACCTTTTTTGTTACAAGAGCCAAGCGAACGAGTTAAACAAAAGTGCTGATGATCTTCAAAGTAAAAGAGAGAGGGTACAAAAGGAAGCTGAGGAAGCTGAAAGAAATGGGAGGCAAATCCATACTGATGTTAGAGATTGGTTGCAGGAAGTGGAAGAAATAATCCCTAAAACTGAGGAGTTTCAGAAAGATGGTGGCAATGCGAAGACCAAGTGTTCCAGTTTTAATGGCTTGTTTCCAAACATGATTGTAAGGCATCAACTAGGAAGAAGAGCAGCAAAGCTAACAGTGGACCTTAATAAGCTCCTGAATGACTCAGAGTTTGATGGAGTTTCTTTTCGTCCTTCTCCGGCGTGGACAGGAGCACCTTTTACTGAGATTGGTTATGAAAGCTTGGAGtcaagaattaaaattgtgGAAGAAATTATGAAAGCATTGAAAAATTCAAGTGTCCGAACCATTGGGATTTGTGGACTAGGTGGGGTAGGAAAGACCACTTTAGTCAAAGAAGTCGCTAATAAAGCTAGAGAAATGAAGTTGTTTAATGTGGTGGTTATTGCAACTGTAACGAAGAAtcctcaaattaaaaatattcaaggaCAAATCGCTGATACGTTGGGGATGACATTGGAGGAGGAAACTGAGACCGGAAGAGCAGGCCAGTTACGGGAGAGATTGAAGAAAGATAAGGAGAATACGCTTGTAATCCTAGATGATATTTGGGATCGAGTGGACTTGAATAAGTTGGGTATTCCAGTTCAAGATGATGATTCCAGCCAGAAGACTATGAGAAATGAATCTGTTTTACCTGGAAACAAGAGTGAAAAGGAAATGTCTGGAGGATGTAAAATTATGTTGACTTCTAGAAGCAAAGAGGTGTTGTCTAGTCAAATGGATGTCAACGAAAACTCAGTATTCTCTGTGGGAGTTTTGGAGGAAAAGGAAGCTGAGACGTTGTTCAAAAAGGTAACTGGACTGCAGGATAAAAATTCAGAAGAGTTTGATTCATTAGCATCAAAAATTGCCAAGAAGTGTGCAGGATTGCCCGTGGCCATAGTTACAATTGGAAGggcattaaaaaataagagttctTTTGTATGGAATGATGCCCTTCGGCAACTTGAAAGACAAGAATTCACTGGAGTACAGGAATCTTTAGAGTTTTCTACAAAGTTGAGTTATGATCATCTAGAAAATGAGGAGCTCAAAGCCACTTTCATACTTTGTGCTCAAATGGGACATGATTGTCTAATTGTGGACTTGCTGAAGTACTGCATTGGTTTGGGTATTCTCGAAGGGGTCTGCTCAATTGGAGAAGCTCGAGGTAAACTGAATGTGTTGATTGCAAGCCTAAAAtactcaaatttattattggaaaGTTATTCTAGCGATCGTTTCACCATGCATGACATTGTTCGTGACGCTGCATTATCAATAGCAATTAAGGAGCATAATGCATTAATTAAGAGATAcatcaagttagatgattggCTTGATGAGGATAAACTTGAAAAGTATACTACTATTTCCTTACACTGTTGTGATATTGTTGATGAGCTTCCTGCAAGTATTAATTGTCCCAGACTCCAAGTGTTACgcattgaaaataatgatCATTCTTTAAGAATACCAGATAAGTTTTTTGAAGGAATGACAAAGCTCCGAGTATTGGCACTGACGAACATTGATCTATCACACATGCCTTCTTCAATCAAATGCCTAAAAACCCTTAGAATGCTTTGTTTAGAGCAATGTATGATTGGTGAGGGATTATGCCTTGATTGGAGgattgaagaaattgaaaattctta	1883	0.3664	MEFLSILVDKVLDIVLKPAQRELGYLFCYKSQANELNKSADDLQSKRERVQKEAEEAERNGRQIHTDVRDWLQEVEEIIPKTEEFQKDGGNAKTKCSSFNGLFPNMIVRHQLGRRAAKLTVDLNKLLNDSEFDGVSFRPSPAWTGAPFTEIGYESLESRIKIVEEIMKALKNSSVRTIGICGLGGVGKTTLVKEVANKAREMKLFNVVVIATVTKNPQIKNIQGQIADTLGMTLEEETETGRAGQLRERLKKDKENTLVILDDIWDRVDLNKLGIPVQDDDSSQKTMRNESVLPGNKSEKEMSGGCKIMLTSRSKEVLSSQMDVNENSVFSVGVLEEKEAETLFKKVTGLQDKNSEEFDSLASKIAKKCAGLPVAIVTIGRALKNKSSFVWNDALRQLERQEFTGVQESLEFSTKLSYDHLENEELKATFILCAQMGHDCLIVDLLKYCIGLGILEGVCSIGEARGKLNVLIASLKYSNLLLESYSSDRFTMHDIVRDAALSIAIKEHNALIKRYIKLDDWLDEDKLEKYTTISLHCCDIVDELPASINCPRLQVLRIENNDHSLRIPDKFFEGMTKLRVLALTNIDLSHMPSSIKCLKTLRMLCLEQCMIGEGLCLDWRIEEIENS	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva02g01099	627	CDD	AAA	159	264	-	-
	Bva02g01099	627	PRINTS	Disease resistance protein signature	177	192	-	-
	Bva02g01099	627	PRINTS	Disease resistance protein signature	251	265	-	-
	Bva02g01099	627	PRINTS	Disease resistance protein signature	369	383	-	-
	Bva02g01099	627	PANTHER	-	1	619	-	-
	Bva02g01099	627	MobiDBLite	consensus disorder prediction	279	293	-	-
	Bva02g01099	627	Pfam	NB-ARC domain	303	416	IPR002182	GO:0043531
	Bva02g01099	627	Pfam	NB-ARC domain	162	287	IPR002182	GO:0043531
	Bva02g01099	627	Gene3D	Ribonuclease Inhibitor	478	626	IPR032675	-
	Bva02g01099	627	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	155	433	IPR027417	-
	Bva02g01099	627	PANTHER	RPP4C4	1	619	-	-
	Bva02g01099	627	Coils	Coil	33	67	-	-
	Bva02g01099	627	Pfam	Leucine rich repeat	551	610	IPR001611	GO:0005515
	Bva02g01099	627	SUPERFAMILY	L domain-like	518	612	-	-
	Bva02g01099	627	MobiDBLite	consensus disorder prediction	279	304	-	-
	Bva02g01099	627	Gene3D	-	153	327	IPR027417	-
	Bva02g01099	627	SMART	AAA_5	174	354	IPR003593	-
	Bva02g01099	627	Coils	Coil	153	173	-	-
	Bva02g01099	627	Gene3D	-	334	422	IPR042197	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva02g01099	Bva-Chr2	15190937	15202451	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva02g01099	175	507	WRKY Transcription Factor Family	AT5G45050	26.361	2.26e-06	48.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva02g01099	-		-	adu:107485533	629.017