Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01087 ATGAGCAAATATATACCAACCAGACCTGATGTTGTGAGTATTGGGGCACTTCTCTCTTTCAATTCTACCATTGGCATGGTTGCGAAAGTAGCAATAGCAGCAGCAGTTGATGATATAAATTCTAGTCCAAAGGTTCTTAATGGAACAAAGCTGAAAATTTCAGCGCTGGATGCTAATCAAAATGGCTTTCTAGGCATAATCAAGGCTCTAAGGTTAATGGAGAATGACACAATGGCTATAATTGGCCCTGAGTTTTCTGTCTCAGCTCACACAATCTCACAGGTTGCAAATGAGCTCCAGGTCCCGCTTTTGTCATTTTCGGCCACAGACCCCACCCTTTCTTCCTTGGAGTTCCCATACTTCGTTAGAACAACGCAGAGTGATCTCTTCCAGATGTCTGCAATATCAGATATTGTAGATTACTATGAGTGGAGAGATGTCATAGCAATTTATGTTGAGGATGATTATGGGAGAAATGGGGTTTCTGTTTTAGTGGATAAGCTAGCTGAGAAACGATGCAAGATATTGTACAAAGCACCTCTTAGTCATAACATGAGCCGGTTTGACATAATTCATGTTCTGAATAAGATAGCATTAATGGAGTCTAGGGTTTTGATACTTCACGCATATGCAGATTTGGGTCTACGAGTTTTTGATGTTGCAAAAGACTTAAGCATGATGAGTGCTGGTTTTGTTTGGATAGCCACTGACTGGCTTTCCACTGAACTGGATGCTGCTTCTGGTCTTGCTAGAAGGGCCATCGATGGCATTCAAGGTGTTCTTACGCTGCGTATATACACCCCAGATTctgaaattaaaaggaaacttGTTTCCAGGTGGGAAAGATTAAATGATAGAAAGTCAGCTAGTGGTCCTGTAGGATTGAATACATACGGTTTATATGCTTATGACACTGTATGGCTTCTGGCTCGAGCAATTGATGAGCTTCTAACTCAGGGAAGtggtatttcattttcaactgaTTCGGAGTTAACTCAACTAAATGGAAAGAGTTTGTGTTTTAATTCTGTGAGAATTTTTAATGAAGGAAACCTTTTGCTTAAGAGTATATTTAAGGTCAATTTGACTGGAGTAACGGGCAAATTGAAGTGCAATTCAGATGGTTGTGTGGCTAATCCTGCATATGAAGTTATCAATGTCATTGGCACTGGCCCTAGGAAAATTGGTTATTGGTCCAATTATTCAGGATTATCAGTGGTGCCTCCAGAAAGTCAGTACTCAAAGCCTAATGATTCTTCCAGCTCCAGCCAACAACTATATGGAGTTGTCTGGCCTGGACAAACATCAGTGAAGCCTCGCAGGTGGGCATATCCAAATGATGGAAAGCCTTTGAGAATTGCTATCCAAAACgcttttttcaaagaaattctTTATCAGGCAGAAGGCAATGGTACATATTATGGCTTCTGCATTGATGTTTTTACTGCTGCACTGAACTTGTTGCCATATAGAATCACATATCAAATTCTTCCATCCATTCATGGTCAGCATTACCCAACTGGCACGGAGCTTCTGCACATGGTCCAAATGGGGGAATATGATGCTGTGGTAGGCGACATTTCAATCACCACTGACCGCATGCGCATGGTGGATTTCACTCAGCCATATACAGACTCTGGTCTGGTTGTTGTGGCTCCCATCAGGAAGTTAAACTCAAGTACCTGGGCCTTTTTGAGACCCTTTACTCCAATGATGTGGTGTGTCACAGGTTTATCTTTCCTCATGGTGGGACTAGTTATTTGGATCTTGGAGCATAGGAGAAATGATGATTTTAGGGGACCTCCTAGAAAACAAGTTATCACTATACTATTGTTCAGCTTTTCAACCTTGTCCTCTTCTCAGAGAGAAAAGACAGTGACCAATCTTAGTCGCTTTGTGCTTATAGTTTGGCTATTTGTGGTGCTAATACTGAACTCAACCTATACAGCAAGTTTGTCCTCAATCCTTACAGTGGAGCAGCTATCTTCTAATATCAAAGGAATTGAGAGTTTACTGGCAAGCAACGATCGAATTGGTTACCAAAGAGGTTCATTCTCTGAGAATTACTTAGTTAATGAACTAAACATACTGCCTGAGAGGCTTGTTCCTCTGGACTCACCAGAGGAGTATGAAAAAGCTTTAATCAATGGTCCTGAGAAGCGTGGTGTTGCTGCATTGGTCGATGAACGTGTATACATGGAGCTTTTCCTTTCTACCAGATGTGAATTCGGCATAGTAGGCCAAGATTTCATGAAAATAAGCTGGGCATTCGCTTTTCAAAAGGATTCACCATATTA 2297 0.4049 MSKYIPTRPDVVSIGALLSFNSTIGMVAKVAIAAAVDDINSSPKVLNGTKLKISALDANQNGFLGIIKALRLMENDTMAIIGPEFSVSAHTISQVANELQVPLLSFSATDPTLSSLEFPYFVRTTQSDLFQMSAISDIVDYYEWRDVIAIYVEDDYGRNGVSVLVDKLAEKRCKILYKAPLSHNMSRFDIIHVLNKIALMESRVLILHAYADLGLRVFDVAKDLSMMSAGFVWIATDWLSTELDAASGLARRAIDGIQGVLTLRIYTPDSEIKRKLVSRWERLNDRKSASGPVGLNTYGLYAYDTVWLLARAIDELLTQGSGISFSTDSELTQLNGKSLCFNSVRIFNEGNLLLKSIFKVNLTGVTGKLKCNSDGCVANPAYEVINVIGTGPRKIGYWSNYSGLSVVPPESQYSKPNDSSSSSQQLYGVVWPGQTSVKPRRWAYPNDGKPLRIAIQNAFFKEILYQAEGNGTYYGFCIDVFTAALNLLPYRITYQILPSIHGQHYPTGTELLHMVQMGEYDAVVGDISITTDRMRMVDFTQPYTDSGLVVVAPIRKLNSSTWAFLRPFTPMMWCVTGLSFLMVGLVIWILEHRRNDDFRGPPRKQVITILLFSFSTLSSSQREKTVTNLSRFVLIVWLFVVLILNSTYTASLSSILTVEQLSSNIKGIESLLASNDRIGYQRGSFSENYLVNELNILPERLVPLDSPEEYEKALINGPEKRGVAALVDERVYMELFLSTRCEFGIVGQDFMKISWAFAFQKDSPY 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01087 765 Gene3D - 561 689 - -
Bva02g01087 765 PANTHER GLUTAMATE RECEPTOR 5 764 - -
Bva02g01087 765 PIRSF IGluLR_plant 2 765 IPR017103 -
Bva02g01087 765 Gene3D - 436 560 - -
Bva02g01087 765 Pfam Ligand-gated ion channel 572 675 IPR001320 GO:0015276|GO:0016020
Bva02g01087 765 Pfam Bacterial extracellular solute-binding proteins, family 3 468 761 IPR001638 -
Bva02g01087 765 Pfam Receptor family ligand binding region 30 389 IPR001828 -
Bva02g01087 765 Gene3D - 30 379 - -
Bva02g01087 765 CDD PBP1_GABAb_receptor_plant 13 408 IPR044440 -
Bva02g01087 765 Gene3D - 127 404 - -
Bva02g01087 765 SUPERFAMILY Periplasmic binding protein-like I 8 399 IPR028082 -
Bva02g01087 765 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 5 764 - -
Bva02g01087 765 SUPERFAMILY Periplasmic binding protein-like II 427 764 - -
Bva02g01087 765 SMART GluR_14 452 765 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01087 Bva-Chr2 15108847 15114282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01087 1 764 Ion Channels AT3G51480 54.712 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01087 K05387 - jre:108984269 949.888