Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01083 ATGACCAAGCAAGCAGCCattgttttagttttgatGGTTTTGCTCAAAATTTCTGACACTGAAATGAGCAAAGAGATACCAACCAGACCTGATGTTATTAGTATTGGAgcacttttctctttcaattctACAATTGGCCAAGTTGCAAAAGTAGCAATAGCAGCAGCAGTTGATGATGTAAATTCTAGTCCACAGGTTCTTAATGAAACAAAGCTGAAAGTTTCAATGCAGGATGCAAATCATAATGGCTTTCTAGGCATGATCAAGGCTCTAAGGTTAATGGAGAATGACATAATGGCTATAATTGGCCCCGAGTTTTCTGTCTCAGCTCACACAATTTCACAGGTAGCAACTGAGCTCCAGGTCCCTCTTTTATCATTTGCAGCCACAGAACCCACCCTGTCTTCCCTAGAGTTCCCATACTTTGTTAGAACAACACAGAGTGATCTCTTTCAAATGTCAGCAATAGCAGATATTTTAGATTACTATGAGTGGACAGATGTCATAGCAATTTATGTTGAGGATGATTATGGGAGAAATGGGGTTGCTGTTTTAGGGGATAAGCTAGCTGAGAAAAGACGTAGGATATTTTACAAAGCATCTCTTAGTCCTAACATGAGCCGGCTTGACATAATTCATGTTCTGAGTAAGCTAGCATCAATAGAGTCTATGGTTTTGATACTTCATACATATCCAGATTTGGGCCTAGAGGTTTTAGATGTTGCAAAAGACTTAGGGATGATGCGTGCTGGTTATGTTTGGATCACCACTGACTGGCTTTCCACTGTTTTGGATGCTAATTCTGATCTTGCCAAAAAGGCCATTGATGGCATTGAAGGTGTTCTTACGCTGCGTATATACACCCAAGATTctgaaatgaaaaggaaacttATTTCCAGGTGGGAAGGATTAACTGATGGAAAATCAGCTAGCGGTTCGGTAGGATTGAACACATATGGTTTATATGCCTATGACACTGTATGGCTTCTTGCTCAAGCAATTGATGAGCTTCTAATTCAGGGAactcatatttcattttcaaccgATTCAAAGTTAACCCAACTAAATGGCAAGAGTTGGAGCTTTGATtctgtgaaaatttttaatgaaggaAACTTGTTGCTCAAGAGCATTTTAAAGGTCAATTTGACTGGTGTAACAGGGAAGATGATGTGCAATTCGGATGGTTGTGTGGTTAATCCTGCATATGAAGTCATCAATGTCATTGGCTCTGGCCTTAGGAAAATTGGTTATTGGTCCAATTATTCTGGATTATCTGTGCTGCCTCCAGAAAACCACCACGCGAAGCCTAATGATACTTCCAGCTCCAAGCAACAACTACATGGAGTAGTCTGGCCTGGACAAACAACAGAGAAGCCTCGTGGATGGGTATATCCAAATGATGGAAAGCCTTTGAGAATAGCTGTCACAAAGccttttttcaaagaaattatttttcaggTAGAAGGCACCAGTGCATATTCTGGCTTCTGCATTGATGTATTTAATGCTGCAGTTGACTTGTTGCCATATACCTTCCCGTATCAGTTTGTTCCATCCACTCATCATCAGCATCAACCAAATAACACAGAGCTCATGTATATGGTCCAAAGAGGGGTCTACGATGCTGCGGTAGGTGGCATCGCAGTCACCACTAGCCGCATGCGAATGGTGGATTTTACTCAGCCATTCGTTGAGTCTGGTCTGGTTGTTGTGGCTCCCATCAGGAAGTTAAACTTAAGTACCTGGGCCTTTTTGAGACCCTTTACTCCGATGCTGTGGTGTGTCACAGGTTTATCTTTCCTCATTGTGGGAGTAGTTATCTGGATCTTGGAGCATAGGAGAAACGATGATTTTAGGGGACCTCCCAGAAAACAAGTTATCACTATACTATTGTTCAGCTTTTCAACCTTGTTCCCTTCTCAGAGAGAAAAGACAGTGACCAATCTTAGTCGCTTTCTGCTTATAATTTGGCTATCTGTGGTGCTAATACTGAACTCAACCTACACAGCAAGTTTGTCATCAATCCTTACAGTGGAGCGGCTATCTTCTAATATCAAAGGAATTGAGAGTTTGCTTTCAAGCAACCACCCTATTGGTTACCAAATAGGTTCATTTGCTGGGAATTATTTAGCTAATGAACTAAACATACACCATTCGAGGATTGTTCCTCTGAACTCACCAGAGGAGTATGAAAAAGCTTTAATCAATGGTCCTGAGAAAGGGGGTGTTGCTGCATTGGTCTCTGAACGTGTAACCATGGAGATTTTCCTCTCCACCAGATGTGAATTCAGCATAGTGGGCCaagatttaatgaaaattggCTGGGCATTCGCCTTCAAAAGAGATTCACCACTTGCAGTAGACATGTCAGCTGCTATAATAAAGCTCTCAGAGTGTGGAGAACTCCAGAGGATTCGTGACAAATGGCTGAAACAAAGTGCTTGTATCAAGGAAGATGGGAAGAAAGAACTAGACCGTCTTCCACTTAAAAACTTTCTTTGTCTATTTCTCATATGTGGATCAGTTGGCCTGCTCGTACTCCTTGTATACCTGACTCAAATGGTGAATAAGTTCATCAAACATAACTCAGATAAGTCTCAGTCTTCTACTTTGAGATCATGGTCTGCAGCCCTTTCTTCATTTGCTTCATTTctcaatgaaaaagaagaacttATTCAAAGCAAACCGATGGGAAGGCAGATGGAGAGGTCATCTGTTGAACGTTG 2729 0.3947 MTKQAAIVLVLMVLLKISDTEMSKEIPTRPDVISIGALFSFNSTIGQVAKVAIAAAVDDVNSSPQVLNETKLKVSMQDANHNGFLGMIKALRLMENDIMAIIGPEFSVSAHTISQVATELQVPLLSFAATEPTLSSLEFPYFVRTTQSDLFQMSAIADILDYYEWTDVIAIYVEDDYGRNGVAVLGDKLAEKRRRIFYKASLSPNMSRLDIIHVLSKLASIESMVLILHTYPDLGLEVLDVAKDLGMMRAGYVWITTDWLSTVLDANSDLAKKAIDGIEGVLTLRIYTQDSEMKRKLISRWEGLTDGKSASGSVGLNTYGLYAYDTVWLLAQAIDELLIQGTHISFSTDSKLTQLNGKSWSFDSVKIFNEGNLLLKSILKVNLTGVTGKMMCNSDGCVVNPAYEVINVIGSGLRKIGYWSNYSGLSVLPPENHHAKPNDTSSSKQQLHGVVWPGQTTEKPRGWVYPNDGKPLRIAVTKPFFKEIIFQVEGTSAYSGFCIDVFNAAVDLLPYTFPYQFVPSTHHQHQPNNTELMYMVQRGVYDAAVGGIAVTTSRMRMVDFTQPFVESGLVVVAPIRKLNLSTWAFLRPFTPMLWCVTGLSFLIVGVVIWILEHRRNDDFRGPPRKQVITILLFSFSTLFPSQREKTVTNLSRFLLIIWLSVVLILNSTYTASLSSILTVERLSSNIKGIESLLSSNHPIGYQIGSFAGNYLANELNIHHSRIVPLNSPEEYEKALINGPEKGGVAALVSERVTMEIFLSTRCEFSIVGQDLMKIGWAFAFKRDSPLAVDMSAAIIKLSECGELQRIRDKWLKQSACIKEDGKKELDRLPLKNFLCLFLICGSVGLLVLLVYLTQMVNKFIKHNSDKSQSSTLRSWSAALSSFASFLNEKEELIQSKPMGRQMERSSVER 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01083 909 PIRSF IGluLR_plant 1 908 IPR017103 -
Bva02g01083 909 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 21 895 - -
Bva02g01083 909 SMART GluR_14 473 813 IPR001320 GO:0015276|GO:0016020
Bva02g01083 909 PANTHER GLUTAMATE RECEPTOR 21 895 - -
Bva02g01083 909 Gene3D - 725 818 - -
Bva02g01083 909 Pfam Bacterial extracellular solute-binding proteins, family 3 491 812 IPR001638 -
Bva02g01083 909 Gene3D - 467 581 - -
Bva02g01083 909 Gene3D - 148 425 - -
Bva02g01083 909 SUPERFAMILY Periplasmic binding protein-like I 29 463 IPR028082 -
Bva02g01083 909 Gene3D - 582 706 - -
Bva02g01083 909 SUPERFAMILY Periplasmic binding protein-like II 449 814 - -
Bva02g01083 909 Pfam Ligand-gated ion channel 813 841 IPR001320 GO:0015276|GO:0016020
Bva02g01083 909 Gene3D - 51 400 - -
Bva02g01083 909 Pfam Receptor family ligand binding region 51 410 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01083 Bva-Chr2 15074670 15084007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01083 8 903 Ion Channels AT3G51480 52.836 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01083 K05387 - tcc:18610633 1062.75