Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01081 ATGACCACAATTGGCCCCCAGTTTTCTGTCTCAGCTCGCACAATTTCACAGGTTGCAAATGAGGTCCAGGTCtctcttttgtcatttttagcCACTGATCACACCCTTTCTTCCCCAGAGTTCCCATACTTTGTTAGAACAACACCGAGTGATTTCTTCCAGATGTCAGAAATAGCAGATATTTTTGATTACTATGAGTGGAGAGATGTCATAGCAATTTATGTTGAGGATGATTATGGGAGAAATGGGGTTGCTGTATCAGGGGATAAGCTAGCTGAGAAAAGATGTAAGATATCGTACAAAGCACCTCTTAGTCCTAACATGAGCCGGTTTGACATAATTCATGTTCTGAGTAAGCTACCATCAATGGAGTCTAAGGTTTTAATACTTCATACATATGCAGATTTGGGTCTAGAGGTTTTTGATGTTGCAAAAGACATTGGGATGATGAGTGCTGGTTATGTTTGGATGACTACTGACTGGCTTTCCACTGTACTGGATACTGATTCTTATCTTTCTACATGGGCCATTGATGGCATTCAAGAAGTTCTTACGCTTCGTATGTACACCCCAGCGTCTGAAATTAAAACCAACCTTATCTCCAGGTGGGAAAGATTAACTGATGGTAAATCAGCTAGAGGTTCAGTAGGATTGAATGCATATGGTTTATATGCGTATGACACTGTATGGCTTCTGGCTCAAGCAATTGATGAGCCTCTAACTCAGGGAactcatatttcattttcaagtgATTCAAAGTTAACCCAACTAAATGGAAAGAGTTTGAATTTCGATTCTGTGAGAATTTTTAATGAAGGAAACCTGTTGCTTAATAGCATATTTAAGGTCAATTTAACAGGTGTAACAGGTAAGTTGAAGTGCAATTCAGATGGTTGTGTGGTTAATCCTGCATATGAAGTTGTCAATGTCATTGGCAATGGCCGTAGGAAAATAGTGAAGCCTCGCGGGCGGGTATATCCAAATGATGGAAAGCCTTTGAGAATTGCTATCCCAAAGCCTTTTTTCAGAGAAATTCTTTATCAGGTAGAAGGCACTGGAAGCATGGATGTGTTTACTGCTGCACTGGACTTGTTGCCATATAGCTTCCGATATCAGTTTATTCCATATAGCGAGCATCAGCCAAATACCAGAGAGCTCGTGCATATGGTCCAAATGGGGgTCTATGATGCTGTGGCAGGTGGCATCGCAGTCACCACTTGCCGCATGCGAATGGTGGATTTTACTCAGCCATACGTTGAGTCTGGTTTATCTTTCCTCGTTGTGGGAGTAGTTATCTGGATCTTGAAGCACAGGAGAAATGATGATTTTAGGGGACCTCCTAGGAAACAAGTTGTCACTGTACTATTGTTGAGCTTTTCAACCTTGTCCTCTTCTCAGAGAGAAAAGACAGTGACCAATCTTAGTCGCTTTCTGCTTGTAGTTTGGCTATTTGTGGTGCTAATACTGAACTCAACCTATGCAGCAAGTTTGTCCTCAATCCTTACAGTGGAGCAGCTATCTTCTAATATCAATGAACGAAACATACAGCGTTCAAGGCTTGTTCCTCTGAACTCACCAGAGGAGTATGAAAAAGCTTTAATCAATGGTCCTGAGAAAGGTGGTGTTGCTGCTTTGGTCGATGATCGTGTAGATATGGAGATTTTCCTCTCTACCAGATGTGAATTCACCATAGTTGGCCCagattttgtgaaaattggCTGGGCATTTCCCTTCCAAAGGGATTCACCACTTGCAATAGACATGTCAACTGCCATAATAAAGCTCTCAGAGAATGGAGAACTCCAGAGAATTCGTGACAAATGGCTGAAACGAAGCCCTTGCATCAAGCAAGTAGAGAGTGAACCCGGCAGCGACTGTGACTTTACTGGGACATGCCAAACCAAGGGAGACTGTGCTGGACCATGTCAAAGTCTTGGCCACTCTCCGCTTGCTGTTCTTTGTGTTCCTTATGATCCCTTGGGTCCAGGATACCATTGTTGCTACATCATCGCTTA 2015 0.4154 MTTIGPQFSVSARTISQVANEVQVSLLSFLATDHTLSSPEFPYFVRTTPSDFFQMSEIADIFDYYEWRDVIAIYVEDDYGRNGVAVSGDKLAEKRCKISYKAPLSPNMSRFDIIHVLSKLPSMESKVLILHTYADLGLEVFDVAKDIGMMSAGYVWMTTDWLSTVLDTDSYLSTWAIDGIQEVLTLRMYTPASEIKTNLISRWERLTDGKSARGSVGLNAYGLYAYDTVWLLAQAIDEPLTQGTHISFSSDSKLTQLNGKSLNFDSVRIFNEGNLLLNSIFKVNLTGVTGKLKCNSDGCVVNPAYEVVNVIGNGRRKIVKPRGRVYPNDGKPLRIAIPKPFFREILYQVEGTGSMDVFTAALDLLPYSFRYQFIPYSEHQPNTRELVHMVQMGVYDAVAGGIAVTTCRMRMVDFTQPYVESGLSFLVVGVVIWILKHRRNDDFRGPPRKQVVTVLLLSFSTLSSSQREKTVTNLSRFLLVVWLFVVLILNSTYAASLSSILTVEQLSSNINERNIQRSRLVPLNSPEEYEKALINGPEKGGVAALVDDRVDMEIFLSTRCEFTIVGPDFVKIGWAFPFQRDSPLAIDMSTAIIKLSENGELQRIRDKWLKRSPCIKQVESEPGSDCDFTGTCQTKGDCAGPCQSLGHSPLAVLCVPYDPLGPGYHCCYIIA 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01081 671 PANTHER GLUTAMATE RECEPTOR 423 618 - -
Bva02g01081 671 PRINTS Metabotropic glutamate GPCR signature 70 87 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bva02g01081 671 PRINTS Metabotropic glutamate GPCR signature 35 54 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bva02g01081 671 PRINTS Metabotropic glutamate GPCR signature 54 70 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bva02g01081 671 PRINTS Metabotropic glutamate GPCR signature 3 29 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bva02g01081 671 SUPERFAMILY Periplasmic binding protein-like I 4 318 IPR028082 -
Bva02g01081 671 Gene3D - 418 522 - -
Bva02g01081 671 Pfam Ligand-gated ion channel 423 512 IPR001320 GO:0015276|GO:0016020
Bva02g01081 671 SMART GluR_14 334 611 IPR001320 GO:0015276|GO:0016020
Bva02g01081 671 SUPERFAMILY Periplasmic binding protein-like II 354 614 - -
Bva02g01081 671 PANTHER GLUTAMATE RECEPTOR 319 423 - -
Bva02g01081 671 PANTHER GLUTAMATE RECEPTOR 3 318 - -
Bva02g01081 671 Pfam Receptor family ligand binding region 4 312 IPR001828 -
Bva02g01081 671 Gene3D - 3 302 - -
Bva02g01081 671 Gene3D - 50 318 - -
Bva02g01081 671 Gene3D - 523 616 - -
Bva02g01081 671 Pfam Bacterial extracellular solute-binding proteins, family 3 375 610 IPR001638 -
Bva02g01081 671 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 423 618 - -
Bva02g01081 671 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 319 423 - -
Bva02g01081 671 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01081 Bva-Chr2 15053064 15059096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01081 4 617 Ion Channels AT3G51480 46.499 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01081 K05387 - vvi:100262768 685.641