Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01002 ATGCAACAGACCGCCTGTTATGAAGTCACGGCAATTAATCCCAATGAAATCTGGAAATCTAGCAACGTATTCTCAGGGCCTCTTCCTCTCTTGGCACTTCAACTTTGTTTCGTCATGCTCTGCTCTCGCATTTCCTACTGCATCCTCAAACCTTTGCATCAGCCTCGCTTTATTTCTGACATTTTTGCTGGCAACATGATTGGTCCACAATATTTGCTGGCAACCATATTTTGGAGATTGTTTTATCCAGCGTCTGGAATCCTCAACGTTGAAACCATAACACACGTGGGTCTCCTCTACTATGTGTTCCTCTCTGGGTTGGAGATGAATTTAGACGTCATCCTGCAAGCATCAAAGAAGGGAACCAGCATTGCTGTAGCAGGAATCATCATTCCGATGTTGATGGGTGCAGGAATCTTCTTTCTGCATCAGTCGACTTACAGATTGCCACTTGCTCGCATGTTTTTCGATGACAACAGTCCTAAAGCATATTTGTTTTGGACTATGTCTCTTAGTACCACAGGTTTTCCTGTCGTTGCACGCATCCTAGCTGATCTCAAACTCTTCTACACAGGACTAGGAAGAGCTGCATTGAATGCTGCAATGATCAGTGATTTCTACAACTGGGTTCTCTTCGTAATATTAATTCCATTTGCCACtaacaatcaaaatcaaaaggcTGTCTTCTCAGCACTGAGCACCATATTGTTCATTGTATTCTGTCTCTTTGTTGTGCATCCTCCTCTTAAGCGGTTTATTAATCGCAAAACCAATGACGATTCCTGGGACAATTACCAACTCGTCTTTGTGCTTGTTGGGGCTTTAGCCTTCGGATATGTTACGGACTTCCTTGGAACACATTCCATTGTCGgggcttttgtttttggacTGATTATTCCTCCAGGGAAATTCTCCGACATGCTTATAGAAAAGTCAgatgattttgtttcttgggCTCTGGCTCCACAGTTCTTCATTGGTGCCGGCTTAAGAATCAACCATGCAATCCTTTCTCATCTGCAAAGTGGGTTATGGACATCGCTGCTCATCCTCTTGTTATGCATCCCAAAGATTTTGAGCACTGTAATAGCCACAACCTTCTTTGGTATGTCCATTAGAGATGGGGTCGGTCTTGGAATCCTCATGAACACCAAAGGTGTCCTGTCTACTGTCTGGCTTATTCTTGCATGGGACAGAAAgATTCTCAACCGTGGATCATACTCAGTTATAGCAACTTCTGTTTTTCTAATGACTGCCATAGTGGCTCCTGTGATTAATTACATGTACAAGCCAAAGAAGAGATTTGAGAGGTACAAGCTGAGAACTGTAGAGAAGTTAAGGAAAGATGTAGAGCTTCGAATTTTGGCTTGTGTCCACAACAATCGCCACGCTAGCAGCATGGTAAACCTGATTGAAGCCTTTAATACCACAAGAGTTTCCCCTTTGCATGTCTTTGTTCTTCAGCTGGTTGAACTCACAGGACGTGCCACAGCCATTCTTAATGCACATATGGAAAAGAAGCATCAGAATAGTAGCGAGCTGGAATCGTGGCAGAACCTCACCAAATCACAGGCAGATTTAGAGTGCATCACCAATACCTTTAAAGGATTTTGTGATGGAAATGATGCTACAAGAGTTGAGATCCTCACTGCTCTGTCAGTTTATGATACGATTCATGAGGATATATACACATTAGCAGAGGACAGATGTACATCCTTAGTTCTACTTCCATTTTTCAAGCAACCAAACGTAGAAGGTGATCTAGAGACAACCAATGTTGCACACAGAGACATAAACCTTAATGTCATGAAAGATGCTGCTTGTTCTGTCGGACTTTTTGTCGATCGCGGTCTTGGGTCATTAACCAACACCACATTTCGTGTTCTAGTGCTATTCATTGGCGGGCCTGATGACAGGGAAGCCTTAGCTGTCGCTTGGAGAATGGCTGGGAATAAAAGAGTGCAACTTTCTGTAGTGAGGATTCTTTTATACGATGAAGCTGCAACAATGAGTCGATCCGGTCGTgttgaagatcaagaaaatcTGCTATCTACATTAATGGACGGTGAGAAGCAGAAGCAGTTGGATGATgagtatatatgtttatttcgGCATAAAGCTGTGCACAATGAGGATTCTATCAATTACTTTGAGAAGGTTGTCCATAATGGAGATGAGATTAGTTCACTCCTGAGGGAATTGGATGAGATTGGCTATGACTTATATGTTGTtggaaaagggaaaggaagaaaCTCTGCTCTCTTGTCAAATTTATTGGAATTCAGTGACTGGCCAGAACTTGGAGTTATAGGGGACATTTTGGCGTCACCCACTTTTGGTTCATCTGTGCTTGTTCTGCAGCAATACGGCTCTCAGGGACGAGACTTCAGTACAAAAGTTATGAAACCTAACCGTATCTTAACACACAATAATAATGAGTTTGAGACAATTGCTGTCAGGACAGAATA 2468 0.4084 MQQTACYEVTAINPNEIWKSSNVFSGPLPLLALQLCFVMLCSRISYCILKPLHQPRFISDIFAGNMIGPQYLLATIFWRLFYPASGILNVETITHVGLLYYVFLSGLEMNLDVILQASKKGTSIAVAGIIIPMLMGAGIFFLHQSTYRLPLARMFFDDNSPKAYLFWTMSLSTTGFPVVARILADLKLFYTGLGRAALNAAMISDFYNWVLFVILIPFATNNQNQKAVFSALSTILFIVFCLFVVHPPLKRFINRKTNDDSWDNYQLVFVLVGALAFGYVTDFLGTHSIVGAFVFGLIIPPGKFSDMLIEKSDDFVSWALAPQFFIGAGLRINHAILSHLQSGLWTSLLILLLCIPKILSTVIATTFFGMSIRDGVGLGILMNTKGVLSTVWLILAWDRKILNRGSYSVIATSVFLMTAIVAPVINYMYKPKKRFERYKLRTVEKLRKDVELRILACVHNNRHASSMVNLIEAFNTTRVSPLHVFVLQLVELTGRATAILNAHMEKKHQNSSELESWQNLTKSQADLECITNTFKGFCDGNDATRVEILTALSVYDTIHEDIYTLAEDRCTSLVLLPFFKQPNVEGDLETTNVAHRDINLNVMKDAACSVGLFVDRGLGSLTNTTFRVLVLFIGGPDDREALAVAWRMAGNKRVQLSVVRILLYDEAATMSRSGRVEDQENLLSTLMDGEKQKQLDDEYICLFRHKAVHNEDSINYFEKVVHNGDEISSLLRELDEIGYDLYVVGKGKGRNSALLSNLLEFSDWPELGVIGDILASPTFGSSVLVLQQYGSQGRDFSTKVMKPNRILTHNNNEFETIAVRTE 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01002 822 PANTHER CATION/H+ EXCHANGER 3 28 802 - -
Bva02g01002 822 Gene3D - 30 437 IPR038770 -
Bva02g01002 822 PANTHER CATION/H + ANTIPORTER 28 802 - -
Bva02g01002 822 Pfam Sodium/hydrogen exchanger family 36 423 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01002 Bva-Chr2 14386719 14389430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01002 6 789 Antiporter Super Family AT2G13620 39.774 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01002 - - gmx:100804266 838.565