Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00988 ATGGCAAcagAGTATGGATTTAAAGGAATTGTTTCTATAAGAGGAGATGTCTACAGTTATGGGATTTTGATGTTAGAAATGTTTACGAGAAAGAAGCCCACGGATGACATGTTTACAGCAGGATTGAGCTTGAAAAGTTGGGTTACAAGTTTGATGCCACATGTTACACAAATTGTAGACTCCAGTTTACTTCAACAAGAAAGGCAGCAGTTTGATGGCATACTATCGTATACATCAACCATTTTGGAGTTGGCTCTTAATTGTTGTGAAGATTTGCCAGAAGCACGAATTAGTTTGAAAAATGTAGTTGCATCtttaaacaaaatcaagatGTTGTTTCTGCAAAAGGCATGGCGAAGGGCATCGTTGAACAAAATGTA 380 0.3579 MATEYGFKGIVSIRGDVYSYGILMLEMFTRKKPTDDMFTAGLSLKSWVTSLMPHVTQIVDSSLLQQERQQFDGILSYTSTILELALNCCEDLPEARISLKNVVASLNKIKMLFLQKAWRRASLNKM 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00988 126 Pfam Protein tyrosine and serine/threonine kinase 1 106 IPR001245 GO:0004672|GO:0006468
Bva02g00988 126 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 117 - -
Bva02g00988 126 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00988 126 SUPERFAMILY Protein kinase-like (PK-like) 1 112 IPR011009 -
Bva02g00988 126 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Bva02g00988 126 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00988 Bva-Chr2 14208706 14211881 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00988 2 119 Receptor kinase-like Gene Family AT3G47570 38.525 2.27e-22 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva02g00988 PK_Tyr_Ser-Thr 5.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00988 - K13420 mtr:MTR_8g469980 138.272