Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00976 ATGACCACTCAGTTGCACCAAAGCCAATATGATAAAACCAAAGAAGAAGACCAGTTACTGCAATCCATTCCCTTGTCATCATCACCATTCTCTGATGACGAAAATGACAACGAAAACGCATCAAAGGAGAAGGTCCATATTTTCGATTTGGAGTCTGCGGGAGCCAGCAGCTCCACGGCAGTGCCACCTTTCTCGTGGAAGAAGCTATGGCTGTTCACGGGCCCTGGCTTATTGATGAGCGTTGCATTTTTGGACCCTGGAAACCTGGAAGGAGATCTTCAAGCGGGAGCCATTGCTGGGTACTCGCTGCTTTGGCTGTTGATGTGGTCGACGATAATGGGTCTGCTAATACAGCTGCTGTCGGCAAGGCTCGGGGTGGCGACGGGGCGGCACCTGGCGGAGCTGTGCAGGGAGGAGTACTCAAATTGGGCAAGGTTGGTGCTGTGGTTCTTGGCGGAGTCGGCGCTCATTGCGGCGGATATTCAAGAGGTTATTGGAAGTGCTATTGCTATTCAAATTCTTAGTCATGGGGTTGTGCCTATTTGGGCTGGAGTGGTAATCACCGCTTGTGATTGTTTCTTCTTCCTATTTCTTGAGAACTATGGAGTGAGGAAATTAGAAGGTGTTTTTGCCGTTTTCATTTCAACGATGGCCCTTTCTTTTGCCTGGATGTTCCATGATACAAAGCCCAGTGGAGAAGAACTTCTCATCGgtATTTTGGTCCCAAAAGTTAGCTCAAAAACACTACGCCAGGCTGTGGAACTTGTTGGTTGTGTTATAACACCTCATAATGTATTCCTCCATTCAGCTTTGGTACAATCAAGGGACATTGATACCCATAACAAAGGCCAGATTCAAGAGGCTCTGAACTACTACTCAATTGAGTCATCAGTTGCACTTTTAATCACCTTTGTGATCAATCTATGTGTAATGACTGTTTTCGCTAGGGTTTTCTACGGTACAGAACAGGCAAATGGCATAGGATTAGTAAATGCTGGGCAATATCTTCAGGAGAGgtatggtggaggattctTCCCCATTCGTTATATATGGGGCATTGGTTTGTTGGCAGCTGGGCAAAGTAGCACCATTAGTGGCACATATGCTGGACAGTTTATAACAGAAGGTTTCCTCAACCTTAACATAAAGAAATGGCTTAGGGCATTGATAACTCGAAGTTGTGCAATTGTGCCAACTATGGTTGTagccatttcttttaatacaaAAGAAGGCTCATTGGATATCTTGAATGAATGGCTTAATGTGCTCCAGGCAATACAGATTCCTTTTGCACTTATCCCCCTTCTTACCTTGGTTTCCAAGGAAGAGGTCATGGGAACCTTCCGAATTGGACCTGTTGTAGAGAGGGTGGCCTGGAGTGTGGCTGTGCTGGTAATATTGGTTTATGGATATATGCTGTTAGAATTCTTCCTCTCTGAAGTGAATGGATTGTTGTATGGTTTGCTGGTCTGCATTGGTGCAGCTGCTTGGTTATCTTTCATTGCATATCTAGTTAAACATAGCGGTGCTTTTCCTTCTATTCTGGTTAGGTCTCCAACCAAAGGCTTTTCTCCTCTTCAAGGTAACTA 1589 0.4424 MTTQLHQSQYDKTKEEDQLLQSIPLSSSPFSDDENDNENASKEKVHIFDLESAGASSSTAVPPFSWKKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWSTIMGLLIQLLSARLGVATGRHLAELCREEYSNWARLVLWFLAESALIAADIQEVIGSAIAIQILSHGVVPIWAGVVITACDCFFFLFLENYGVRKLEGVFAVFISTMALSFAWMFHDTKPSGEELLIGILVPKVSSKTLRQAVELVGCVITPHNVFLHSALVQSRDIDTHNKGQIQEALNYYSIESSVALLITFVINLCVMTVFARVFYGTEQANGIGLVNAGQYLQERYGGGFFPIRYIWGIGLLAAGQSSTISGTYAGQFITEGFLNLNIKKWLRALITRSCAIVPTMVVAISFNTKEGSLDILNEWLNVLQAIQIPFALIPLLTLVSKEEVMGTFRIGPVVERVAWSVAVLVILVYGYMLLEFFLSEVNGLLYGLLVCIGAAAWLSFIAYLVKHSGAFPSILVRSPTKGFSPLQGN 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00976 529 PRINTS Natural resistance-associated macrophage protein signature 421 440 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g00976 529 PRINTS Natural resistance-associated macrophage protein signature 148 174 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g00976 529 PRINTS Natural resistance-associated macrophage protein signature 252 275 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g00976 529 PRINTS Natural resistance-associated macrophage protein signature 359 378 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g00976 529 PRINTS Natural resistance-associated macrophage protein signature 387 404 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g00976 529 PRINTS Natural resistance-associated macrophage protein signature 178 197 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g00976 529 PRINTS Natural resistance-associated macrophage protein signature 203 224 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g00976 529 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 67 445 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g00976 529 MobiDBLite consensus disorder prediction 19 34 - -
Bva02g00976 529 Pfam Natural resistance-associated macrophage protein 90 451 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g00976 529 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 31 529 - -
Bva02g00976 529 MobiDBLite consensus disorder prediction 1 39 - -
Bva02g00976 529 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 31 529 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g00976 529 Hamap Divalent metal cation transporter MntH [mntH]. 55 477 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00976 Bva-Chr2 14038060 14041802 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00976 31 508 Inorganic Solute Cotransporters AT1G47240 73.278 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00976 K21398 - gmx:100801411 845.884