Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00955 ATGGCAGATCCTCGTCCCTCTGAAGCCTCTAGCATATCTGCAGCCTCCGTAGGCAAAAATTCGTGCAAAGATGAAGCTCAGAAATCCAAGATGAGCTCGAAAGAGAGTGAGAAAGCTCATGAATCTGAACCTGATCAGGCTTCTAAGTCAAACCCTCATGTTTTGCTGGATTTGATGAAGATTTCAAGCTATGATTCTGCACACAGGTCGAAGGTGGAGCATGGTTTCTTGAACTCTGGGACTTTTGCTTCATCTTCTAGGGCAAACAATGAAGAGACAGATGAGAACACTCGCGAGAAGACATCGGAGCCAAGTGTTTTCTCTTGTAATTTCTGCAAGAGAGAGTTCTCTTCTTCCCAGGCTTTGGGAGGGCATCAAAATGCCCATAAGCAAGAGAGGGCACTGGCCAAAAGGCGTCAAGGGATTGATGTTGGTCCTTGTGGACATCCATATTTCCCTTATTACCCTTATCCAAGCCTGTCCACCCACTCGTTTTATGGATCATACAATAGGGGACTAGGCGTAAGAATGGAATCCATGATTCACAAGCCTCCTTATGCTTGGACCTCGCCGGGCTATAGGTTTGGCCATGGTGCTGGGTGGTCAAGGCAAAGTGGGTTCAACCCACCAACCGTTAATAGCCTCAGGATTGATGATTTGCAAGCACATAGTGGTGGTGGGTATGGGCTTCTTGGCAGCTCTTCCAGTTCAAGGCTAGGGGAAGGTGACGGTACTCTTCACCTCTTCCGCGAGTCTTCTTCAAGTGTTGCGGCTATCAATGCAAGTCCTGGCTTGAACAAGCCAGCACCTTTAACTACAAGTGGAGAAGAACCCTCCAATGGCAATGATGCTCAACCTTCCAGGCTTGATTTGTCACTTAAGCTTTA 887 0.4758 MADPRPSEASSISAASVGKNSCKDEAQKSKMSSKESEKAHESEPDQASKSNPHVLLDLMKISSYDSAHRSKVEHGFLNSGTFASSSRANNEETDENTREKTSEPSVFSCNFCKREFSSSQALGGHQNAHKQERALAKRRQGIDVGPCGHPYFPYYPYPSLSTHSFYGSYNRGLGVRMESMIHKPPYAWTSPGYRFGHGAGWSRQSGFNPPTVNSLRIDDLQAHSGGGYGLLGSSSSSRLGEGDGTLHLFRESSSSVAAINASPGLNKPAPLTTSGEEPSNGNDAQPSRLDLSLKL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00955 295 MobiDBLite consensus disorder prediction 23 47 - -
Bva02g00955 295 Gene3D Classic Zinc Finger 83 143 - -
Bva02g00955 295 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 4 295 - -
Bva02g00955 295 MobiDBLite consensus disorder prediction 259 287 - -
Bva02g00955 295 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 134 IPR013087 -
Bva02g00955 295 SUPERFAMILY beta-beta-alpha zinc fingers 105 134 IPR036236 -
Bva02g00955 295 ProSitePatterns Zinc finger C2H2 type domain signature. 109 129 IPR013087 -
Bva02g00955 295 MobiDBLite consensus disorder prediction 1 54 - -
Bva02g00955 295 PANTHER ZINC FINGER PROTEIN JAGGED 4 295 IPR045320 GO:0003700
Bva02g00955 295 MobiDBLite consensus disorder prediction 259 295 - -
Bva02g00955 295 MobiDBLite consensus disorder prediction 75 102 - -
Bva02g00955 295 Pfam C2H2-type zinc finger 106 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00955 Bva-Chr2 13630516 13631403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00955 4 215 C2H2 Transcription Factor Family AT5G10970 33.953 9.11e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva02g00955 zf-C2H2_6 1.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00955 - - gmx:102663393 220.32