Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00951 ATGGATCTTGCTTCAGATTCTGTAGAAATTGAAAGGAATGAAACTGGCAAATGTTCCTCCTCCAGTGTAATAGCTATGGATATCACAAGGGAAGATCAATCAGAAAGAGATTTCTGcatcaatattttaagaagTTATGGTCTTCTTGGAGGAGGTTTTCCTACTGAATATGGGGCCTTTGAGGGAGATGCTGTTATTACTGGTGATAGCTGCTGTCGCCGATCATGCAAAATATGTGGTCAGTTTGCTGATTCACTAAAAATGCTTATATGTGATCAATGTGAAGAAGCATATCATCCATCTTGCTGGAATCCACattggaaaaagaaactacCTCTTGATGAGTGGCTTTGTCATTCGTGTCTAAAAAAGAAGCGAAAAATCCTCTCAGAGACAATCACCAGAAGTTCACCTAGTATCAACAGTGAAACGGGTGGAACTATACTATTGATGTTGAAAGAGTCTGAGCCATATACTACTAAAGTGCAGATGGGTAAAGATTTTCAAGCAGAAGTTCCTGACTGGTCAGGTCCAATAGGAAGGCACATGGAAAATCCCTCCCGCAACCTTGATATTCAGAATGGGTCGGGCAACCAGTCTACGCGTAAGAAGGGTAGACGTGGCACACTGTTGAAGGAGTTGACCTATAGCCTTAGTGGTGAGCAGAGGATACCTATTGAGTTTGATTCGAATGGTAAACCATTAGGGCAAAATAGGAAGAAGTTCAAGAGTTTTGTCGCCCTTCTAGGACGTAGTAAGGCTAGCATTTTGAAGAATGAGTGGGATGATGTAGAACTACATGTGAAGGATCAGATTTGGCAAAATATTAAGCTCATCTACAACATTCCGGATAATGAGATGTTGAGAAAGAAGTTGATACAATACGCAGGGGAACGTTGGAAAGCCTTTAAGACGAGTCTTACTAGTAGATACGTGTTTGGTGAGTTTAGGGGCGTCAATCCTTGTGAGGAGTATCCATTTCTTGATGAGGAGACTTGGCAAGCTTTTCTCCAGAGTCGGGAAGACTCTACATTTCTGgagaaaagaagaaaagctcaAGAGATTCAAGCAAAGAATTTGTGCCCCCACAGATTGTCTCGTGGGGGTTATGAATTActtgaagagaaaattatgaatGAGAAGTGGAAACAGCGGCAAGAAGCTCAACAATCTAACCCGTCTATTGTTCTTTCTCCTCCATCTCTACCTACTCGCCATGAGAAGTGGAAGAGAGCACGGCAGACAAAGTCAGGGGAGTATATATCTGAGGAGGCTCGTAGTATTGCTGGGAAGATTGATTCTCTCGAAGAAAAATGCTCTCAAGGAAACTTCACTCCTGTTGGACGAGATGATATCTTGGCCACTGCCATAGGGAAACCAGAGCACCCTGGCCGTGTTCGGGGGATTGGACGAGGAGTGGGTATCAAACAGTACTTTGGAGCTCTTACATGCCATTACCCAGGAGTGGTGACAAGAGATGAGATGAAGGTGATTTTGGCTCAAGTCAAAGAGCAGATGGCAGCGGAGATAACTGCCGCTATTAAAGAGCAAACGGCAGCACAAATAGCTGCCATGAGGGAGGAAATGATCCCCATGTCTAGCTGTCAAATGAACACAACAACCCAACCGGCTCATTCTCCTGTAGTTCAAAGCCAAAAAGGGAGTTGTGTTCATAGACATTTAACGGAGAATCCTACTTTCCAACATACTGGTGCTAACTGTGAGCTTTATTTAGAGGATCCTCACTTGCGTTTAGTGGCCTATGGCAGAGTCTGCAACTTAGGGCCAACCATCCACCACAGACAAATAGAAGAGGATCAAGTAAGAGTGATGGTTGAACGGGTTAAAGATGCAAATGCACTAGTCCCATTCCCAAGTGAGGAGGTACAAACCGTGGGACAAGCccacaataattttattttatggccACAGAAACTTGTTCAGGTGGTTCCGGCTAAGGAAATTGCCTTATCAAGTGAAGCGGTTCCAAAGCTCCAGTCTCAACTCCAAATGGATCCACTTACACGTTTATGTGTAGCAGCAATGAAAATCAAAGAGCCTTTACAACTCAATATGGATCCAGACGTTATAGGCAAGGAGtgcaatttctttatttaccgGAAGGATGTACTGGAGTTCCTGATGGGGAATGAAATGCTTTGTGTATCGGTTTTACAAGTGTTTTTGATgtATCTTCATCACCTTTGTATCTCAAAGGGGAAAAGTGATAAGTATGGATTCATTAGCCCATTTTACATCCAAGTTGTAGGGAACAATGCAGATATGACATCCTCCTACATTAATAGTAGGCTATGTGAAGGCAACAAGGAATGTTACTTGGCACCATATCACCATGGGCAACATTGGCAGTTGATGATTATTTGTCCAAAGCAGAACGTGGTTACTTTCTTATGCTCCCTGTGGTATAAACCGAggaaagaattgaagaatatGATTGATACAGCTTTGAGTATGTACCACGAACTTGTTGGTAAGCACTCACAGAACCTGAAGAAGCCTACATGGGTACTACCACAATGTCGTAAACAAGTGGTAGACACAGAGTGTGGATATTTTGTCATGAGACATATGCTCAATATCATCTCCACTAACATTCTTGAATCATTCGAAcagAGATTCAACGTTAAGGATCCCTTCTCTGAAGAGGAAATTGATGACATTCGAAATCTCTGGGCAAATTACTTTCTCAGCATTACTTCCTTGTG 2726 0.409 MDLASDSVEIERNETGKCSSSSVIAMDITREDQSERDFCINILRSYGLLGGGFPTEYGAFEGDAVITGDSCCRRSCKICGQFADSLKMLICDQCEEAYHPSCWNPHWKKKLPLDEWLCHSCLKKKRKILSETITRSSPSINSETGGTILLMLKESEPYTTKVQMGKDFQAEVPDWSGPIGRHMENPSRNLDIQNGSGNQSTRKKGRRGTLLKELTYSLSGEQRIPIEFDSNGKPLGQNRKKFKSFVALLGRSKASILKNEWDDVELHVKDQIWQNIKLIYNIPDNEMLRKKLIQYAGERWKAFKTSLTSRYVFGEFRGVNPCEEYPFLDEETWQAFLQSREDSTFLEKRRKAQEIQAKNLCPHRLSRGGYELLEEKIMNEKWKQRQEAQQSNPSIVLSPPSLPTRHEKWKRARQTKSGEYISEEARSIAGKIDSLEEKCSQGNFTPVGRDDILATAIGKPEHPGRVRGIGRGVGIKQYFGALTCHYPGVVTRDEMKVILAQVKEQMAAEITAAIKEQTAAQIAAMREEMIPMSSCQMNTTTQPAHSPVVQSQKGSCVHRHLTENPTFQHTGANCELYLEDPHLRLVAYGRVCNLGPTIHHRQIEEDQVRVMVERVKDANALVPFPSEEVQTVGQAHNNFILWPQKLVQVVPAKEIALSSEAVPKLQSQLQMDPLTRLCVAAMKIKEPLQLNMDPDVIGKECNFFIYRKDVLEFLMGNEMLCVSVLQVFLMYLHHLCISKGKSDKYGFISPFYIQVVGNNADMTSSYINSRLCEGNKECYLAPYHHGQHWQLMIICPKQNVVTFLCSLWYKPRKELKNMIDTALSMYHELVGKHSQNLKKPTWVLPQCRKQVVDTECGYFVMRHMLNIISTNILESFEQRFNVKDPFSEEEIDDIRNLWANYFLSITSL 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00951 908 MobiDBLite consensus disorder prediction 184 207 - -
Bva02g00951 908 MobiDBLite consensus disorder prediction 384 399 - -
Bva02g00951 908 Pfam PHD-finger 76 123 IPR019787 -
Bva02g00951 908 SUPERFAMILY FYVE/PHD zinc finger 73 127 IPR011011 -
Bva02g00951 908 MobiDBLite consensus disorder prediction 187 204 - -
Bva02g00951 908 SMART PHD_3 75 122 IPR001965 -
Bva02g00951 908 ProSitePatterns Zinc finger PHD-type signature. 76 121 IPR019786 -
Bva02g00951 908 Gene3D Adenoviral Proteinase; Chain A 679 904 - -
Bva02g00951 908 PANTHER OS10G0338966 PROTEIN-RELATED 194 857 - -
Bva02g00951 908 MobiDBLite consensus disorder prediction 383 405 - -
Bva02g00951 908 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 134 IPR013083 -
Bva02g00951 908 ProSiteProfiles Zinc finger PHD-type profile. 73 124 IPR019787 -
Bva02g00951 908 SUPERFAMILY Cysteine proteinases 701 903 IPR038765 -
Bva02g00951 908 Pfam Ulp1 protease family, C-terminal catalytic domain 776 899 IPR003653 GO:0006508|GO:0008234
Bva02g00951 908 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 194 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00951 Bva-Chr2 13497177 13505171 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00951 76 126 C2H2 Transcription Factor Family AT3G01460 41.176 3.83e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bva02g00951 Peptidase_C48 9.7e-05 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00951 - - gmx:100807274 681.019