Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00888 ATGGAAATTATGGAGTGCATAAAAGATAGAAGGAGAGCGGGTGGTTTGTGGTCTATTTACCAAAGGGTCAAGCAAggTATTCAGACAGCAAAGGAGAAGTTAGACATTGGATCATCTAACAGAAATGATGCTGGCAATACCACATGTGTCGTGCTTGCTGAGGagcaaaatattaattctccTTTAAGGACTGAAAATGGTAAGGAAgtcttaaatgaaaatatttttagttgccAGGATCAGGTTGATTTGAACACTACCCGGTTGGATAATACTGGTCAAAATTCGTTTAAAGAGCCTCAAAATGGCTTGGTGTTTGAATCAAAGGAGGCTGCATATTCTTTCTACAGAGAATACGCTCGTTTGGTGGGATTTGGTATCACAATCAAAGCTAGTCGACGCTCAAAAAAATCTGgtaaatttattgatattaaaattgcTTGTTCAAGATTTGGAAGCAAGCGTGAGTCTAGTACCACTGTTAATCCACGGCCTTGTATAAAGACAGGCTGTAAAGCTGGTATGCATATGAAAAAGACAGCAGATGAAAAATGggttatatatagttttacaCAGGAGCATAATCACGAGATCTGTCCAGATGATTTTTTCAGGGGACGGAACAAGCAACCTAGTAATGTGGCTTTTCAGAAAAAGGTTATGCAATTGGCTCTAGATGGGGGCGATGTTAAAGTGATGACTGAATACTTCATGTCTATGCAGGATGAGAATCCCAACTTCTTTTATGCAATTGACCTGGATCATGACAGATGTTTGAGAAGTGTGCTTTGGGTTGATTCAAAGGGTAGACTTGATTATAGAAGCTTCAATGATGTTGTTTTTATTGACACTTTTTAcctgaaaaacaaatataagatTCCTTTTATACCTATTGTAGGAGTCAATCATCACTTCCAATATATTTTGTTGGGTTGTGCCTTGATTGGAGAGGAGagtgtttcttcatttatatGGTTAATGCAGACGTGGCTTAAAGCAGTGGATGGTCTTGCTCCAAAGGTGATTATCACTGACcaagaaaatttcttgaaagaaGCTGTTCTACAAGTGTTTCCAGATAAACATCACTGTTTCGGTCTCTGGCATATTTTAAGGAAATTAGATGAAAATTTGGGTCATATCACTAgtcaaaataacaattttgtgGAGAAATTCAACAAATGCATTTATAATTCCTGGTTGCATGAGCAATTTGAAAAGCGATGGTGGAAACTGATCAATAGGTTTGAACTAAAGGACAATGGATGGGTCCAATCTTTGTATGAAGATCGTAAGAAGTGGGTTCCAACTTACTGGTGCAATGTGTTTTTGGGTGGGATGTCAACAACTGTCAGATCTGAAAGTATAATTTCATACTTTGACAAGCACATTCATGTGGATTCTACATTAAAGGAATTAATCAAACAGTATGAAGTGTTCTGTACAGACAGGTTGGACATGGAAGCCAAGGCAGATTTTGAAACACAGAAAAAGCAACCTACATTAAAATCTTTATCACCTTTTGAAAAGCAGGTTGCGTCAGTTTACACTGATAccatatttagaaaatttcaatCTGAAATATTAGGGGTAGTTTCTTGTCAtctccaaaaagaaagagagaacaGAGCAAATGCAGTCTTTCAAGTTTATGATTTTGAAGAACGGAAAAATTTTATGGTGACCTGGAATGAAGTAGAATTGGATGTCTGTTGTTCATGTCATTCATTTGAATACAATGGTTTTCTCTGTAGACATGCTATACTTGTCATTCAGATGTATGGTATAACCAAAATTCCATCCCATTATATCTTGAAACGGTGGACAAAAGATGCCAAGGCAAATCAATTGACCGGTGATAGAATGCAAAGGCCATCTAACAGATCGCAACGTTTCAATGATCTGTGTAGACGGGCTGTTAAATTAAGTGAAATTGGGTCTTTGTCTCAAGATGCTTATCGCATTGCTTTCCAGGCATTGGAGGAAGTTTATAAAAACTGTGTGAAAGTGAATAATTCTGTCAGAAGCACGTCAGAGCCTAACACATCGGCTCACACTGGTTTTGTTGATGTTGAAGAGAACAATGGtaacaataagaaaaagtcaaccaagaaaaaaaagtcacaTAATAAAAGGGGACGATCTGAACCAGAAAGTATCAATATGAGGGTACAGGACCGTTTTCATCAGAGGGAACAAATGAATCCAAGGGCACACAACTTCAGTAACTGCTACATTCCTCAACAGGAAACACAAACTGTGCACTTGGATTCTAGAGCTCCAACTCTGGAGAGCTATAGTGTGGTGCGACAAAATATGCAAGGAGATGGACAGCTGAATTCAGTTTCTCCTGTGCAAGATGAGTACTATAGCAATCAAGAATCTGAGCAGGGGCTGGGACAGTTGTATTCTGTACCCAACCGCGGTCCTCGTCCCGGGTTGCATCAAAGCATGCAAGGACTGCTGCAAGGGCAACTTAGTTTTAGAACAACAATACAGGGATGTTTTGACCTTCAACAAGAATGTCTGGATGACATGGGACAACCTGACCGAGCCTG 2558 0.3612 MEIMECIKDRRRAGGLWSIYQRVKQGIQTAKEKLDIGSSNRNDAGNTTCVVLAEEQNINSPLRTENGKEVLNENIFSCQDQVDLNTTRLDNTGQNSFKEPQNGLVFESKEAAYSFYREYARLVGFGITIKASRRSKKSGKFIDIKIACSRFGSKRESSTTVNPRPCIKTGCKAGMHMKKTADEKWVIYSFTQEHNHEICPDDFFRGRNKQPSNVAFQKKVMQLALDGGDVKVMTEYFMSMQDENPNFFYAIDLDHDRCLRSVLWVDSKGRLDYRSFNDVVFIDTFYLKNKYKIPFIPIVGVNHHFQYILLGCALIGEESVSSFIWLMQTWLKAVDGLAPKVIITDQENFLKEAVLQVFPDKHHCFGLWHILRKLDENLGHITSQNNNFVEKFNKCIYNSWLHEQFEKRWWKLINRFELKDNGWVQSLYEDRKKWVPTYWCNVFLGGMSTTVRSESIISYFDKHIHVDSTLKELIKQYEVFCTDRLDMEAKADFETQKKQPTLKSLSPFEKQVASVYTDTIFRKFQSEILGVVSCHLQKERENRANAVFQVYDFEERKNFMVTWNEVELDVCCSCHSFEYNGFLCRHAILVIQMYGITKIPSHYILKRWTKDAKANQLTGDRMQRPSNRSQRFNDLCRRAVKLSEIGSLSQDAYRIAFQALEEVYKNCVKVNNSVRSTSEPNTSAHTGFVDVEENNGNNKKKSTKKKKSHNKRGRSEPESINMRVQDRFHQREQMNPRAHNFSNCYIPQQETQTVHLDSRAPTLESYSVVRQNMQGDLNSVSPVQDEYYSNQESEQGLGQLYSVPNRGPRPGLHQSMQGLLQGQLSFRTTIQGCFDLQQECLDDMGQPDRA 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00888 850 PANTHER PROTEIN FAR1-RELATED SEQUENCE 2 63 776 - -
Bva02g00888 850 MobiDBLite consensus disorder prediction 674 693 - -
Bva02g00888 850 MobiDBLite consensus disorder prediction 674 725 - -
Bva02g00888 850 Pfam MULE transposase domain 279 372 IPR018289 -
Bva02g00888 850 ProSiteProfiles Zinc finger SWIM-type profile. 564 595 IPR007527 GO:0008270
Bva02g00888 850 SMART 26again6 570 597 IPR006564 GO:0008270
Bva02g00888 850 Pfam SWIM zinc finger 565 594 IPR007527 GO:0008270
Bva02g00888 850 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 776 IPR031052 GO:0006355
Bva02g00888 850 Pfam FAR1 DNA-binding domain 114 199 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00888 Bva-Chr2 12868660 12873172 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva02g00888 MULE 9.7e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00888 - - gmx:100802811 1031.17