Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00885 ATGTCTAGCCCTACAATCCAGCACTCAGTTTCTGATCAAACCCTGGGCAACTCATTCAAGCCTTCATCTTCGAAAATCCCGGTGGGCAAACCCAGAATTTGGAGCAAGAATGATTTATACAACATGACTGAAGAAGGTGGGAGTAGTCCGTACTACAAAGGTCTAACCGATCAATCTCTTGCTGTTTACAAAGCAGCACCAACACAACTAGCACCATCAATTGATCATCAGAGCCACCATCCCAGTAATGTCCCTCTTTCGCCACTCGAGAGTAGCCGTTATTACAAAGGGCTCATAGATTATACTCTTGCTCTTTCTGGAAAGCAACCAGTTTCAGATGGCTTTATCAATGATCTTGATCAGAGTTTCCATAGTGGTGGTTCTCTCCCATGTGAGTGTAGTCCATACTACAAAGGCCTAACAGATTATACCCTTGCTCTTTATGGACAACAACTTGCAGCACATGGTTCATCTGCATCGCTTGGATTTAATGTCAGCCCTAATTTCACAAGCATGCCTTTAAATCTATGGACCATGTGCTTTCCTGGATCAAACCCTGGACCAGGGTACACGTCTCCATCACTGCCCAAGACTAAGGCCGGCTGCTCGAATCAGATGGAGCCAAAGAAGGTCAATGATGATCTTGGATTGGTGACTGAAGGGAAGCCTTTGAGGGAGAGAGTTTCAGAGCCAAGTATGGCAGGGAAAGTGGTAGAAGAAACTGTGGAGATAATCGCGACTGCGAAGGTCGGTAACTATGGTTTGGTAGGTGAGGAAGAGAAGCCCTTGAGAGAGAGTATATCTGTTTCTGAACAGAGAGTTGTACCAGAGTTAACACTAAAAGCTGGGTATGAAAACCAGGAGAAGTACACATGGGCAAATAAGTACCAGCCCAAAGCCCTGGGAGACTTCATATGCAACAAAGAGAAAGCACATGAGCTACAAGAAATGGTGAAAGGGGGATGTGGTTGCAagcattttatatttgaagcACCACCAGGTGTAGGGAAGAGAACCATGATTCGTTGTATGCTTCGAGAGGTTTTTGGCAATATAcaggtatatatattaaacttatttaagCAAAATAAAGGAGAAATGGTGTCTAGCATTGAGATGAACATGAAAAGGTCAACCCATCATGTGGAGGTAAATCTCTCAGACACAAAGGGATATGAGAAGCATGTCCTCGTTGATCTATTCAAAGAAACATATGAGAACTTTCTTGACAATTCAGCTCCTTGTGTCCCTGAAAACTGCCAAGCAATTGTTTTGTATGAGTCAGAAAAGCTATCCAAAGAATCTTTATTGTACATTAAGTGGCTGCTAGAAAGGTATAAAGCGGTAGGGTGTAATAAGGTCTTCTTTTGCTGCTCTGATGAATCTAAGCTTCAACCTGTAAAAGCACTTTGTACCACTATCAAGCTTAAACCTCCTACATGCGAAGagATAGTTAAGGTTTTGGAGTTTATAGGGCACAAAGAAGGAATCGAATTGCCCCACAACTTGGCTGTGAAGATAGTTGAGAAGGCGAAAAACAACCTTCGCCAAGCAATTCGTTCATTTGAAGCTACTTGCCAAAACAAGCTTCCCCTCGAAGAGGATCAACTGATTTTAACTGGATGGgaagatgaaatttcaaatattgcCAAGAATACAATTGATGAGCAAAGTCCAAGACAGCTGTACAATATTCGTCGAAAGCTTCAAAATCTGATGATTCATAATGTATCCCCtggctttatttttatggtaaGAATTCCAATGTTTACATTAATGTATCTGCATAATATTTGTTCCTA 1802 0.4051 MSSPTIQHSVSDQTLGNSFKPSSSKIPVGKPRIWSKNDLYNMTEEGGSSPYYKGLTDQSLAVYKAAPTQLAPSIDHQSHHPSNVPLSPLESSRYYKGLIDYTLALSGKQPVSDGFINDLDQSFHSGGSLPCECSPYYKGLTDYTLALYGQQLAAHGSSASLGFNVSPNFTSMPLNLWTMCFPGSNPGPGYTSPSLPKTKAGCSNQMEPKKVNDDLGLVTEGKPLRERVSEPSMAGKVVEETVEIIATAKVGNYGLVGEEEKPLRESISVSEQRVVPELTLKAGYENQEKYTWANKYQPKALGDFICNKEKAHELQEMVKGGCGCKHFIFEAPPGVGKRTMIRCMLREVFGNIQVYILNLFKQNKGEMVSSIEMNMKRSTHHVEVNLSDTKGYEKHVLVDLFKETYENFLDNSAPCVPENCQAIVLYESEKLSKESLLYIKWLLERYKAVGCNKVFFCCSDESKLQPVKALCTTIKLKPPTCEEIVKVLEFIGHKEGIELPHNLAVKIVEKAKNNLRQAIRSFEATCQNKLPLEEDQLILTGWEDEISNIAKNTIDEQSPRQLYNIRRKLQNLMIHNVSPGFIFMVRIPMFTLMYLHNICS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00885 600 MobiDBLite consensus disorder prediction 1 24 - -
Bva02g00885 600 Gene3D - 481 540 - -
Bva02g00885 600 PANTHER OS10G0574500 PROTEIN 225 587 - -
Bva02g00885 600 MobiDBLite consensus disorder prediction 1 27 - -
Bva02g00885 600 Gene3D - 290 479 IPR027417 -
Bva02g00885 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 290 534 IPR027417 -
Bva02g00885 600 Gene3D - 541 588 - -
Bva02g00885 600 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 225 587 - -
Bva02g00885 600 Coils Coil 505 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00885 Bva-Chr2 12773999 12782112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00885 292 583 Core DNA Replication Machinery Family AT5G27740 31.544 2.01e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00885 K10756 - gmx:102664389 447.588