Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00854 ATGGTGCCACCACAACTAGTAGCACGATGCCAacatcttcttcttcgtccaaacttgaagaagaagaaagagctTTCCTTTAAAGCCAATGGTGGAGCAGTGGACATAACATCTCACATCGTTGCAAGTGAGCTTCAAGCCGTGAACTGGACTGCATTCCCTAATTTAGTCAGCCTAGATCTGAGTGGAATCTATCTACAGGGGGCAATTCCTGAGAATATTGGTGCACTTATAAAGCTCACCCATCTCAACATTTCCAATAATAATCTCACAGatAAGCTTCCCCGTGCAATTGCAAGCCTCACTCAGCTTGTGATGCTTGATGTTTCTTCTAATAGCATCAGTGGCCAGATTCCAGAAGAAATAGACAATTTGAAGAACCTTGTGACACTAAAGTTGGGATCAAACAACTTCAATGGTCTGATTCCAAAAGAAATCGGCAATTTGAAGAACCTCTTGACTCTAGACAGGAGCTCAAACAACTTCGGTGGATCCATCCCTACTAGTTTTGGCCTTTTGTCCAGTCTCATCTATATGCAGCTTTCCAGTAATTTCTTAATTGACGACATACCTCGAGAAATAGGTAAAATAGAGAACTTGACTTGGCTTGACCTTTCATACAACAGACTCACGGGTCCACTTCCACCCATGTTAGATATTATTCAAGCAACTGAGGACTTCGACATCAGGTGGTGCATTGGGACTGGTGCTTATGGTAATGTCTATAGGGCACAACTTCCTAGTGGCAAAATTGTTGCATTCAAGAAAATCCACCGATTAGAATCTCAAGAGCCATCTTTTGATAGAAGTTTTCGAAATGAGATCAAAATGTTGACAGAAATCCGTCATAAAAACATTGTCAAGCTTTATGGCTTTTGTTTACACAACAGGTGCATGTTTCTGGTCTATGAGTATATGGACAGAGTAAGCTTAATTTGGGTTTTGAGCAATGATGACAAAGCACGGGAGTTGAATTGGAGCAAGAGGGTGAATATCATTAAAGGAATAGTAAATGCTTTGTCTTATATGCATCATGATTGTACTTCCACATTTCTCCATCGAGATATATCTAGTAGCAATGTTTTGTTGAACTCAGAATTGGAGGCATTTGTCTCAGACTTGGGACAGCTAGAATCCTTGACCCTGATTCCTCAAATCAAACTCTACTTGTTGgaactattttatatgttgCACCAGTTGTTGCTATTAGCCCCACTGGATCAGAAGCGTGTAAATAGTGACATTGCACCAAAAATTGTCTGCAAGAAGTTTGATTG 1277 0.3884 MVPPQLVARCQHLLLRPNLKKKKELSFKANGGAVDITSHIVASELQAVNWTAFPNLVSLDLSGIYLQGAIPENIGALIKLTHLNISNNNLTDKLPRAIASLTQLVMLDVSSNSISGQIPEEIDNLKNLVTLKLGSNNFNGLIPKEIGNLKNLLTLDRSSNNFGGSIPTSFGLLSSLIYMQLSSNFLIDDIPREIGKIENLTWLDLSYNRLTGPLPPMLDIIQATEDFDIRWCIGTGAYGNVYRAQLPSGKIVAFKKIHRLESQEPSFDRSFRNEIKMLTEIRHKNIVKLYGFCLHNRCMFLVYEYMDRVSLIWVLSNDDKARELNWSKRVNIIKGIVNALSYMHHDCTSTFLHRDISSSNVLLNSELEAFVSDLGQLESLTLIPQIKLYLLELFYMLHQLLLLAPLDQKRVNSDIAPKIVCKKFD 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00854 425 Gene3D Transferase(Phosphotransferase) domain 1 306 385 - -
Bva02g00854 425 Gene3D Ribonuclease Inhibitor 141 220 IPR032675 -
Bva02g00854 425 Gene3D Ribonuclease Inhibitor 17 140 IPR032675 -
Bva02g00854 425 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 40 216 - -
Bva02g00854 425 Pfam Leucine rich repeat 54 114 IPR001611 GO:0005515
Bva02g00854 425 Pfam Leucine rich repeat 159 210 IPR001611 GO:0005515
Bva02g00854 425 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 40 216 - -
Bva02g00854 425 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 219 376 - -
Bva02g00854 425 ProSiteProfiles Protein kinase domain profile. 227 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00854 425 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Bva02g00854 425 SUPERFAMILY Protein kinase-like (PK-like) 207 383 IPR011009 -
Bva02g00854 425 ProSitePatterns Tyrosine protein kinases specific active-site signature. 351 363 IPR008266 GO:0004672|GO:0006468
Bva02g00854 425 Gene3D Phosphorylase Kinase; domain 1 221 305 - -
Bva02g00854 425 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 219 376 - -
Bva02g00854 425 SUPERFAMILY L domain-like 47 236 - -
Bva02g00854 425 Pfam Protein kinase domain 233 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00854 Bva-Chr2 12424831 12430068 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00854 34 375 Receptor kinase-like Gene Family AT4G08850 36.729 5.37e-61 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva02g00854 Pkinase 5.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00854 - - ghi:107926294 322.398