Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00851 ATGGCCCTTCCGTTCTCTGCATCTATTTTGATGGTATTAGTGGCACTGTTAGGTGCCACCACAACTAGTAGCACGATGCCAACATCTTCTTCATCCatagttgaagaagaaagagctTTCCTCCAAAGCAAATGGTGGAGCAGTGGCCATAACATTTCACTTCGTTGCAAGTGGTATGGTATTGTGTGCAACGATGCTGGAAGCATCataaaaatttttctttctaattacCATTATCAGCCTTCTCCACCAGAGCTTCAAGCCATGAACTGGACTGCATTCCCTAATTTAGTCAGCCTAGATCTGAGTGGAATCTATCTACAGGGAGCAATTCCTGAGAATATTGGTGCACTTGTAAAGCTCACCCATCTCAACATTTCCAATAATAATCTTAAAGGTAAGCTCCCTCTTACAATTACAAACCTCACTCGCCTTGTGATGCttgatgtttcttttaatAGCATCAGTGGCCAGATTCCAGAACACATAGGCAATTTGAAGAACCTCTTGACTCTAAACATGAGGTCAAACAACTTCAGTGGATCCATTCCTACTAGTTTTAGCCTTTTGTCCAATCTCATCTATATGCAGTTGTCTAGTAATTTCTTAATCGGCGAGATACCTCCAGAATTGggtaaattaaagaatttgacTTGGCTTGACCTTTCATACAACAGACTCACGGGTCCACTTCCTCCCACATTAGTAGAAATAGGGAACATGGCCAGTTTGAAATCTTTAGAACTTCATTGTGTATTTGGAAAGGTTGAATCTGAGGAAAGACAAACCAAGAATGGGGACTTGTTTTCTATATGGAACTATGATGGTAAAATTGCATATGAAGATATTATTCAAGCAACAGAGGACTTTGACATCAGGTATTGCATTGGGACTGGTGCTTATGGTAGCGTCTATAGGGCACAACTTCCTAATGGCAAAATTGTTGCATTGAAGAAGCTCCACCGATTAGAATCTCAAGAGCCATCTTTTGATAGAAGTTTTCGAAATGAGGTCAAAATGTTGACAGAAATCCGTCATAAATACATTGTCAAGCTTTATGGCTTTTGTTTACATAACAGGTCCATGTTTCTGGTCTTTGAGTATATGGACAGAGGAAGCCTACTTTGGGTTTTGAGCAATGATGACGAAGCACAAGAGTTGAATTGGAGCAAGAGGGTGAATATCATTAAAGGAATAGCAAATGCTTTGTCTTATATGCATCATGATTGTACTTCCACATTTCTCCATCGAGATATATCTAGTAGCAATGTTTTGTTGAACTCAGAATTGGAGGCGTTTGTCTCAGACTTTGGGACAGCTAGAATCCTTGATCCTGATTCCTCAAATCAAACTCTACTTGTTGGAACTATTGGATATGTTGCACCAGAGCTTGCATGCACACTGAGTGTGACTGAAAAAtgtgatgtttatagtttcGGAGTGGTGGCTTTGGAAACAATAATGGGAAAGCATCCAGGAGACTTAATTTCCTCTTTGAGAAATTCTGGTGCTCCTAATATGCTGTTGAAAGATGTATTGGACTCCCGTCTCCCTCTTCCTTTCAATGGGACAGATGCCAAAAATTTGGTTCTGGTGGTGACACTTGCTTTCTCTTGCCTGGATACTAATCCGAGATGTCGACCAACAATGAAGGATGTTGTGAAGGAGTTTCTTGTTTCGAAGCCACAGTTGCTGCTACCTTTCAATGACATTTTAATTCAGCAGTTGCTGAATCAAGAATcaatctttcaaaaata 1757 0.3842 MALPFSASILMVLVALLGATTTSSTMPTSSSSIVEEERAFLQSKWWSSGHNISLRCKWYGIVCNDAGSIIKIFLSNYHYQPSPPELQAMNWTAFPNLVSLDLSGIYLQGAIPENIGALVKLTHLNISNNNLKGKLPLTITNLTRLVMLDVSFNSISGQIPEHIGNLKNLLTLNMRSNNFSGSIPTSFSLLSNLIYMQLSSNFLIGEIPPELGKLKNLTWLDLSYNRLTGPLPPTLVEIGNMASLKSLELHCVFGKVESEERQTKNGDLFSIWNYDGKIAYEDIIQATEDFDIRYCIGTGAYGSVYRAQLPNGKIVALKKLHRLESQEPSFDRSFRNEVKMLTEIRHKYIVKLYGFCLHNRSMFLVFEYMDRGSLLWVLSNDDEAQELNWSKRVNIIKGIANALSYMHHDCTSTFLHRDISSSNVLLNSELEAFVSDFGTARILDPDSSNQTLLVGTIGYVAPELACTLSVTEKCDVYSFGVVALETIMGKHPGDLISSLRNSGAPNMLLKDVLDSRLPLPFNGTDAKNLVLVVTLAFSCLDTNPRCRPTMKDVVKEFLVSKPQLLLPFNDILIQQLLNQESIFQK 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00851 585 Pfam Protein kinase domain 295 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00851 585 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Bva02g00851 585 Gene3D Ribonuclease Inhibitor 187 255 IPR032675 -
Bva02g00851 585 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 32 250 - -
Bva02g00851 585 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 258 576 - -
Bva02g00851 585 ProSiteProfiles Protein kinase domain profile. 290 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00851 585 ProSitePatterns Tyrosine protein kinases specific active-site signature. 414 426 IPR008266 GO:0004672|GO:0006468
Bva02g00851 585 Gene3D Phosphorylase Kinase; domain 1 256 368 - -
Bva02g00851 585 SUPERFAMILY L domain-like 45 250 - -
Bva02g00851 585 SUPERFAMILY Protein kinase-like (PK-like) 271 556 IPR011009 -
Bva02g00851 585 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 258 576 - -
Bva02g00851 585 Pfam Leucine rich repeat 168 227 IPR001611 GO:0005515
Bva02g00851 585 Pfam Leucine rich repeat 95 155 IPR001611 GO:0005515
Bva02g00851 585 Gene3D Transferase(Phosphotransferase) domain 1 369 563 - -
Bva02g00851 585 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Bva02g00851 585 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 32 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00851 Bva-Chr2 12390523 12393312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00851 100 462 Receptor kinase-like Gene Family AT4G08850 40.476 1.82e-93 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva02g00851 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00851 - - vri:117923909 537.724