Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00841 ATGTTTGATGtttcattcaataatatcAATGGTCAGATTCCCGAAGAAATAGGAAGTTTGACCAACCTTGTGAAACTAGACTTGAGCTCAAACAAGTTCAGTGGATCCATCCCTTCTAGTTTGGGTTTCTTGTCCAGTCTCATCCATATGCAGATGtcccaaaatttcttatttggtAAGATACCTCGAGAAAtaggaaaattaaagaatttgacTGTGTTAGACCTTTCAACCAACCAACTCACGGGTCCAATTCCACTTGCTTTAGGTGATTTAAAATATCTGAAGTACTTGATTCTTGATTCAAACCAATTTAATGGTTGCATTCCTCTGGAAACAATGAATTTAAAGAAGGCTCAACTTCCTAGTGGCAAAATTGTTGCACTGAAGAAACTTCACCGATTAGAATCTGAAGAGCCATCTTTTGACAGCAGTTTCCGAAATGAGGTCAAATTCTTGACTGATATTCGTCATAGAAACATTGTCAAGCTTTATGGTTATATTTTGCACAACAGGTGCATGTTTCTGGTCTATGAATATATGGACAGAAGAAGCTTACTTTGGGTTTTGAGCAATGATGACGAAGTTCAGGAGTTGAATTGGAGAAAGAGGAATGTCTCGGACTTTGGCACAGCTAGAATACTTGATCCCGATTCCTCAAATCAAACTCTACTTATTGGTACGGTTGGATATATTGCACCAGAGCTTGCATACACACTGAGTGTGACTGAAAAAtgtgatgtttatagtttagGAGTGGTGGCTTTGGAAACAATGACGGGAAAGCATCCAGGAGAGTTTATTTCCTCTTTGAGAAGTTCTGGTGCTCCTAATATGCTGTTGAAAGATGCCAAAGATGTGGTTTGGTGGTG 872 0.3635 MFDVSFNNINGQIPEEIGSLTNLVKLDLSSNKFSGSIPSSLGFLSSLIHMQMSQNFLFGKIPREIGKLKNLTVLDLSTNQLTGPIPLALGDLKYLKYLILDSNQFNGCIPLETMNLKKAQLPSGKIVALKKLHRLESEEPSFDSSFRNEVKFLTDIRHRNIVKLYGYILHNRCMFLVYEYMDRRSLLWVLSNDDEVQELNWRKRNVSDFGTARILDPDSSNQTLLIGTVGYIAPELAYTLSVTEKCDVYSLGVVALETMTGKHPGEFISSLRSSGAPNMLLKDAKDVVWW 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00841 290 Pfam Leucine Rich Repeat 22 44 IPR001611 GO:0005515
Bva02g00841 290 Pfam Protein kinase domain 206 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00841 290 Pfam Protein kinase domain 121 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00841 290 PRINTS Leucine-rich repeat signature 23 36 - -
Bva02g00841 290 PRINTS Leucine-rich repeat signature 68 81 - -
Bva02g00841 290 Gene3D Ribonuclease Inhibitor 1 117 IPR032675 -
Bva02g00841 290 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 118 204 - -
Bva02g00841 290 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 3 116 - -
Bva02g00841 290 Gene3D Transferase(Phosphotransferase) domain 1 118 204 - -
Bva02g00841 290 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 206 284 - -
Bva02g00841 290 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 116 - -
Bva02g00841 290 Gene3D Transferase(Phosphotransferase) domain 1 205 285 - -
Bva02g00841 290 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 118 204 - -
Bva02g00841 290 SUPERFAMILY Protein kinase-like (PK-like) 119 265 IPR011009 -
Bva02g00841 290 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 206 284 - -
Bva02g00841 290 ProSiteProfiles Protein kinase domain profile. 1 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00841 290 SUPERFAMILY L domain-like 3 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00841 Bva-Chr2 12237620 12239752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00841 3 86 Receptor kinase-like Gene Family AT4G08850 39.286 2.52e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva02g00841 Pkinase 4.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00841 - - ghi:107947983 260.766