Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00808 ATGATGGCCACTACTTCTATTTTGATAGTATTCATGCTTCTCTTGAGTACCATGAATACTAGAACCACGAATActattgaagaagaaagggcTTTGAACCAAAGCCAATGGTGGAGTGGCAAAAACATCTCAAGTATTTGCTACTGGCCCGGTATTGTGTGCAACAAAGCTAGAAGcatcataaaattttctcttttaacttCCGATTACCGGCCTTTTTCTCCACCACAGCTTCGCGCAGTCAACTGGACAGCATTCTTTAATTTAGTCAGTCTAGATCTGAGTGGAATCAGTCTATGGGGAACCATCCCTGAGAATATTTGTGCACTTCTAAAGCTTACCCATCTCAACATTTCCCATAATAATCTTGAAGGTAAGCTCCCTCCTACAATTGCAAACCTCACTCACCTTGTGATGTTTGACGtttcattcaaaaatatcACTGGTCAGATTCCCAAAGAAATAGGAAGTTTGACCAACCTTGTGAAACTAGACTTGAGCTCAAACAAGTTCAGTGGATCCATCCCTTCTAGTTTGGGTTTTTTGTGCAGTCTCATCCATATGCAGATGtcccaaaatttcttatcTGGTGAGATACCTCGAGAAATAgggaaattaaagaatttgacTGTGCTAGACCTTTCAAACAACCAACTCACGGGTCCAATTCCACCTGCTTTAgATATTATTCAATCTACTGAGGACTTCGACATCAAGTACTGCATTGGCACCGGTGCTTATGGTAGTGTCAATAGGGCACAACTTCCTAGTGGCAAAATTGTTGCACTGAAGAAACTTCACCGATTAGAATCTCAAGAGCCATGTTTTGACAGAAGTTTCCACAATGAGGTCAAAATGTTGACTGAGATTCGTCATAGAAACATTGTCAAGCTTTATGGTTATTGTTTGCACAACAGCAATATTTTGTTACACTCAGAATTGGAGGCATTTGTCTCGGACTTTGGCACTGCTAGAATACTTGATCCTGATTCCTCAAATCAAACTCCACTTGTTGGTACGGTTGGATATATTGCACCAGAGCTTGCATACACACTGAGTGTGACTGAAAAAtgtgatgtttatagttttggagtgGTGGCTTTAGAAACAATGATGGGAAAGCATCCAGGAGagtttatttcctttttgagAAATTCTGGTGCTCCTAATATGCTGTTGAAAGATGTATTGGACTCACGTTTCCATCTTCCTTTCAATGGGAGAGATGCCAAAGATTTGGTTTTGGTGGTGACACTTGCTTTGTCTTGCCTGTGTACCTATCCAAGATCTCGGCCAACAATGAAAGATGTTGCTAATGAGTTTCTTGCTTCCAAGCCACCATTGCTGCTACCTTTCAGTTACATCTCCATTCAGCAGTTAAGTAATAAAGAATCCATCAATCTATa 1406 0.3727 MMATTSILIVFMLLLSTMNTRTTNTIEEERALNQSQWWSGKNISSICYWPGIVCNKARSIIKFSLLTSDYRPFSPPQLRAVNWTAFFNLVSLDLSGISLWGTIPENICALLKLTHLNISHNNLEGKLPPTIANLTHLVMFDVSFKNITGQIPKEIGSLTNLVKLDLSSNKFSGSIPSSLGFLCSLIHMQMSQNFLSGEIPREIGKLKNLTVLDLSNNQLTGPIPPALDIIQSTEDFDIKYCIGTGAYGSVNRAQLPSGKIVALKKLHRLESQEPCFDRSFHNEVKMLTEIRHRNIVKLYGYCLHNSNILLHSELEAFVSDFGTARILDPDSSNQTPLVGTVGYIAPELAYTLSVTEKCDVYSFGVVALETMMGKHPGEFISFLRNSGAPNMLLKDVLDSRFHLPFNGRDAKDLVLVVTLALSCLCTYPRSRPTMKDVANEFLASKPPLLLPFSYISIQQLSNKESINL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00808 468 Pfam Leucine Rich Repeat 112 134 IPR001611 GO:0005515
Bva02g00808 468 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 306 460 - -
Bva02g00808 468 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 16 227 - -
Bva02g00808 468 Gene3D Transferase(Phosphotransferase) domain 1 305 447 - -
Bva02g00808 468 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 228 305 - -
Bva02g00808 468 SUPERFAMILY Protein kinase-like (PK-like) 227 453 IPR011009 -
Bva02g00808 468 Pfam Protein kinase domain 305 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00808 468 Gene3D Transferase(Phosphotransferase) domain 1 234 304 - -
Bva02g00808 468 Gene3D Ribonuclease Inhibitor 20 129 IPR032675 -
Bva02g00808 468 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 306 460 - -
Bva02g00808 468 SUPERFAMILY L domain-like 47 246 - -
Bva02g00808 468 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 16 227 - -
Bva02g00808 468 Gene3D Ribonuclease Inhibitor 130 233 IPR032675 -
Bva02g00808 468 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 228 305 - -
Bva02g00808 468 Pfam Leucine rich repeat 160 219 IPR001611 GO:0005515
Bva02g00808 468 ProSitePatterns Protein kinases ATP-binding region signature. 242 264 IPR017441 GO:0005524
Bva02g00808 468 PRINTS Leucine-rich repeat signature 206 219 - -
Bva02g00808 468 PRINTS Leucine-rich repeat signature 161 174 - -
Bva02g00808 468 ProSiteProfiles Protein kinase domain profile. 89 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00808 Bva-Chr2 11861272 11864125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00808 89 265 Receptor kinase-like Gene Family AT2G15080 35.028 1.16e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva02g00808 Pkinase 3.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00808 - - vri:117923909 347.436