Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00803 ATGTTCCATAACGCTACTGCAACAAACccaaattcttcattttcgAATGAGGAGGGAAATGCTTTGCGCAAGTCGCAGTGGTGGAACACTAGCGATTATCTTTTCAATAGCTCAAACCATTGCCTTTGGTCTGGTATTAAATGCAATGAGGCTGGGAGCATTACTGCGATTTATGCACCACCAAATCCAGTAAGCAGGAGAAATGAATTCGGGGATATCAACTTGACTGCATTTCCTAATTTAGAACTTTTGGATCTTTCGGGAATGGGATTGAAGGGAAGCATTCCCGCCGAGATAGCCACTCTCCCGAGGCTAAAATTTCTCATCCTGTTCAACAACCTATTATCAGGTGAGATTCTTAGcacattttctaattttactcaACTCCAGGAGCTCGATCTTTCTCGAAATCACATCAGTGTTGTCATACCCTCACAAATaggaaatttaacaaatttgttgAGATTAGATCTAAGTTATAACAATTTATGTGGTCATCTTTTTCTCGGAATAGAGAGTTTAAAgaatttggtttggtttgatcTTAGTTGGAACATGTTAGCTGGTCCAGTTCCTCCTAAATTGGGATCATTAAAGAATCTAACTGACATATACCTTGGTAACAACATTATCACTGGTCAAATTCCATCTTCCTTAGGACACTTGAAACATTTGGAAGCTCTTGATCTTGGTGATATCATCCAAGCAACAGAAGATTTTGACATCAAGTATTGCATTGGCACTGGTGGCTATGGTAGTGTGTACAGAGCAAAGCTACCCATGGGCAGGATTGTTGCACTAAAGAAACTTCATAGGATGGAATATCAAAACCCAAGATTTGCTCGGAGCTTTCAGAATGAGATCAAGATGTTGACAAAAATTCGTCACCGAAACATTGTGAAGCTTCATGGATTTTGTTTGCACAATCGGTGTATGTTCTTGATCTACGAACACATAGAGAGAGGAAGCCTATTTTGTGCCTTGAATAATGATGTTGAAGCCCAACAGTTGAATTGGGGTAAGAGGGTGAATATCATTAAAAGAATATCACATGCTTTGGCATGCATGCATCATGACTTCTTGCCAGCTATTATAGATAGCACATGCTTAGGGACTAACTCGAAGTA 1127 0.3736 MFHNATATNPNSSFSNEEGNALRKSQWWNTSDYLFNSSNHCLWSGIKCNEAGSITAIYAPPNPVSRRNEFGDINLTAFPNLELLDLSGMGLKGSIPAEIATLPRLKFLILFNNLLSGEILSTFSNFTQLQELDLSRNHISVVIPSQIGNLTNLLRLDLSYNNLCGHLFLGIESLKNLVWFDLSWNMLAGPVPPKLGSLKNLTDIYLGNNIITGQIPSSLGHLKHLEALDLGDIIQATEDFDIKYCIGTGGYGSVYRAKLPMGRIVALKKLHRMEYQNPRFARSFQNEIKMLTKIRHRNIVKLHGFCLHNRCMFLIYEHIERGSLFCALNNDVEAQQLNWGKRVNIIKRISHALACMHHDFLPAIIDSTCLGTNSK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00803 375 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Bva02g00803 375 ProSitePatterns Protein kinases ATP-binding region signature. 246 268 IPR017441 GO:0005524
Bva02g00803 375 Gene3D Ribonuclease Inhibitor 9 168 IPR032675 -
Bva02g00803 375 SUPERFAMILY L domain-like 23 232 - -
Bva02g00803 375 Pfam Protein kinase domain 244 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00803 375 Gene3D Transferase(Phosphotransferase) domain 1 235 365 - -
Bva02g00803 375 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 32 230 - -
Bva02g00803 375 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 232 366 - -
Bva02g00803 375 Pfam Leucine Rich Repeat 200 222 IPR001611 GO:0005515
Bva02g00803 375 ProSiteProfiles Protein kinase domain profile. 240 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00803 375 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 32 230 - -
Bva02g00803 375 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 232 366 - -
Bva02g00803 375 SMART serkin_6 240 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00803 375 Gene3D Ribonuclease Inhibitor 169 234 IPR032675 -
Bva02g00803 375 SUPERFAMILY Protein kinase-like (PK-like) 225 360 IPR011009 -
Bva02g00803 375 PRINTS Leucine-rich repeat signature 129 142 - -
Bva02g00803 375 PRINTS Leucine-rich repeat signature 150 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00803 Bva-Chr2 11774354 11776165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00803 75 365 Receptor kinase-like Gene Family AT4G08850 37.126 5.08e-52 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva02g00803 Pkinase 5.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00803 - - vri:117923909 301.982