Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00719 ATGGATACCCAGAAGAAAATGAGGGAAGCTTTCATTCGCAGATTCCTGGAGTCCAACCCCATCCATGAAGTCAGACTCGTCTGCATGGAGGCCCTTGCAGAAGCCATGGAAGAGGAACATAACCCACTAgcagaagaaattttgaaacgCCTGAGCCAGAAAGTTAGCCCACTTGGTAACACTCGAGAGCGTGTCGCATTCAACTTGTGCAAAGACATAACTTGCAACGCTCAGGAAGATTATCTCAGAAAGGAGTCCTGCAAGAACATGGAGCCAGCATTTCAAACATTCTACCAATGGTTCCCACATGGCAAAGTTGCTCACTTTGCAGAAAATTCAAGAATCCTTGAATCTATACCAGAAGATTCAGATGAAATACTCATAGTGGACTTTGACATGGGAGAAGGGGTTCAATGGGCTCTCATGATCGAGGCCATTGCACATAAACAACAAAGAACAttgaaaattacatcaatcaaatGGGAAGATGAGATCTCAGAGTGTGTTTTCGCTCGGTGGAAGTTCGAGGACACCAAAAATAAGCTCTTTGCACATGCCAAATCCTGTGGCCTAAAGCTAAAAGTGGAGGAGAAAGGAATTGAAGATTTGTTTACGGAGTTAAAAAAGATGAACAAAAGGGGAGGAAGTGGAAAGCGGGAATGGCTAGCCTTTAATTGCATGGTGGGTCTTCCACATATGGGGAGGCCAAGAAGTAGAAGGCATGCCATGGAGTTTCTTAGGGTGGCTAAGGATTTGATACGCAGCCATGGAAACAATGGTATTATCACTTTTGGTGATGGAGATGCCATTGAGAAACTCAAGAACTGCTTGAATTTCAAGtcattttttaaaggaaatttaGTGCATTACGAAGCTTTATTGGAGTCAATCGAAGCAAATTTCCCGAAGAAACTCTCAGAAGCAAGAATTGCCATcgaatctctctttgtggcaCCTTATGTGTCTTCTGTTGTTTGGTTGCGGAAATGGGAGGAGGTTGGGGAAAATTGTCATCTCCAAGGGAGAATTGGGTTAGAGGGTAGCAGATTTAGCAGAGAGATTTCAAATGAAGTTAGAGAAATGTTGAAAGGCAGTGAAAGTTCATACCAGGCAAGGATTGGAGGAGATAACGATAATGAACTTGTTTTGGAATGGGAAGGGACAGTTAGTGAGAGTCTCAACATGGGCAATTTAGAGCCGAACACCTTAGaagtttttttcatttttttgttattattaagtaTACAAAATATAGGATTAGTacagaattattttcttcttgatgtagaagaaaaatattg 1301 0.3851 MDTQKKMREAFIRRFLESNPIHEVRLVCMEALAEAMEEEHNPLAEEILKRLSQKVSPLGNTRERVAFNLCKDITCNAQEDYLRKESCKNMEPAFQTFYQWFPHGKVAHFAENSRILESIPEDSDEILIVDFDMGEGVQWALMIEAIAHKQQRTLKITSIKWEDEISECVFARWKFEDTKNKLFAHAKSCGLKLKVEEKGIEDLFTELKKMNKRGGSGKREWLAFNCMVGLPHMGRPRSRRHAMEFLRVAKDLIRSHGNNGIITFGDGDAIEKLKNCLNFKSFFKGNLVHYEALLESIEANFPKKLSEARIAIESLFVAPYVSSVVWLRKWEEVGENCHLQGRIGLEGSRFSREISNEVREMLKGSESSYQARIGGDNDNELVLEWEGTVSESLNMGNLEPNTLEVFFIFLLLLSIQNIGLVQNYFLLDVEEKY 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00719 433 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 391 IPR005202 -
Bva02g00719 433 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 29 391 - -
Bva02g00719 433 Pfam GRAS domain family 31 387 IPR005202 -
Bva02g00719 433 ProSiteProfiles GRAS family profile. 12 397 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00719 Bva-Chr2 10680356 10681726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00719 44 313 GRAS Transcription Factor Family AT5G66770 27.817 8.64e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva02g00719 GRAS 7.1e-36 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00719 - - vvi:104880018 399.438