Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00707 ATGGCCGGCCTAGACTTGGGTTCAGCATCTCACTTTGTTCATCATCTTCAACGCCCTGACCTTCAATCCAACGAAGATGATGAAAACCAAGACCAAGACGACAATAACCCTCAAGGGCTAGAGCTTGTTACACCAAATCATGGGCCCGGAGATGTGGTGGGTCGCCGGCCGAGAGGGAGGCCTCCCGGCTCCAAGAACAAACCTAAACCACCGGTGATCATAACCCGGGAAAGCGCAAACACGCTCCGTGCTCATATTCTTGAAGTTACCAGTGGCTGTGATGTGTTTGATTCGGTGTCAACCTATGCAAGGAAGAGGCAAAGAGGGATCTGTGTTTTGAGTGGTAACGGCACGGTTACCAATGTGATGCTGAGGCAGCCGGCAGCGGCAGGCTCGGTGGTGACGCTGCACGGCCGGTTTGAGATACTATCTTTGTCAGGGTCATTTTTGCCCCCACCAGCACCACCAGGTGCTACAAGTTTGACCATTTTTCTGGCTGGTGGTCAGGGTCAAGTGGTTGGAGGAAATGTTGTTGGTCCTTTGATTGCTTCTGGACCAGTTATTGTTATTGCTTCTTCGTTTACAAACGTTGCTTATGAGAGGTTGCCCTTGGATGAAGATGAATCGGTACAGATGCAGCAACCACAATCATCCGGTGGCGCTGGCGGTGTTGGAGCCAACAACACGTTTCCAGACCCATCTTCTGGGCTGCCTTTCTTCAACTTGCCACTAAACATGCCGCAGTTACCCGTTGATGGTTGGACCGGAAACTCCGGCGGGCGACAATA 788 0.519 MAGLDLGSASHFVHHLQRPDLQSNEDDENQDQDDNNPQGLELVTPNHGPGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTSGCDVFDSVSTYARKRQRGICVLSGNGTVTNVMLRQPAAAGSVVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGPLIASGPVIVIASSFTNVAYERLPLDEDESVQMQQPQSSGGAGGVGANNTFPDPSSGLPFFNLPLNMPQLPVDGWTGNSGGRQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00707 262 MobiDBLite consensus disorder prediction 209 235 - -
Bva02g00707 262 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 262 - -
Bva02g00707 262 MobiDBLite consensus disorder prediction 17 73 - -
Bva02g00707 262 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 262 IPR014476 GO:0003680
Bva02g00707 262 CDD DUF296 83 166 IPR005175 -
Bva02g00707 262 Gene3D - 82 215 - -
Bva02g00707 262 ProSiteProfiles PPC domain profile profile. 79 216 IPR005175 -
Bva02g00707 262 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Bva02g00707 262 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 211 - -
Bva02g00707 262 MobiDBLite consensus disorder prediction 207 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00707 Bva-Chr2 10469038 10470248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00707 1 261 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 63.123 1.56e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00707 - - gmx:100803960 394.815