Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00697 ATGACAAAGTCATACTGctgtgttttccttttctcttctctttccttcttgGTTACCCTGTTTGGGGTTGGGGCTACTCCTATTCTTTTAGGAGGAAAGACGTTGAAAATTGGGATACCCATTAAAACTGATTTTAAGGAGTTTGTGGATGTTAAACTGAATAGTACAAACCAGGCCATACAGAACCAGGTTTCTGGGTACTCAATTGACGTTTTCTTTGCTGTAATATCTTATCTGGAAAGGCACTTAGCCTTAAATGTTTCTTATGAGTTTGAAGCTTTCGTAAACACAGAGGGGAACATTGCTGGGACCTACAACGATCTTCTGCATCAAATTCCTGAAAAGTATGATGCAGTGGTGGGCGATGTTACTATTGTGGCAAATCGATCAACCTATGTAGATTTCACGTTGCCATATTTTGAATCAGGAGTCAAGATGCTTATACAAGTTAGGCATAGGCGTCACCTGGATATGTGGAACTTTCTGCAGCCATTTAATTGGGATCTTTGGCTGTCCATCTTCGCATTTTGTGTCTTTATAGGATTGGTGTTATTATTCATGGAACGTAATGCAAATAAAGAAGCTGGAATGAATGATTCACCAAGTCGAAAACAACCTAGTACTAGATCATCAATTTTATGGCTTCCTGTAGCTCGAACGGTGCTTCCTGAAAAATCTGTTGCCAAGAAATGCTCTAGGTTTGTACTGTTGGTGTGGTTAGGGTTGGCATTCGTTCTCATGCAAAGCTACACAGCAAATTTGTCCACAATCTTGACAGTAGATCAATTAAAGCCATATTATCTTACAATTGAAAGTCTAATAAGAGACCGGGCAAATGTTGGATACCGGCACGGTTCATTCATAGGAGATTTGTTAAGAGATCACTTACACTTTGATGAATCGACGCTTAAAAATTACTCCAAGATGGAAAATTATCGTAATGCTTTAAGTAAAGGAACTCAAAATGGAGTTATTGCTGCTATGTTTGATGAATTGCCCTACATTAAAGTCTTCCTCAAAAGGTATGGTTCCAAGTACATGATGGCTGGACCTACCTATCCGAAccatggttttggttttgCATTCCCTCTAGGTTCAAACCTTACTTCTTACTTCTCAAGAGCCATATTAAATGTCACTGAAAGTCCAACAATGAATaggattgaagaaaaatactttgGCGACAATCATGATGATCTCCAAGATCAGTTCAACCAAATATCATCAGAAACTCCTAGCCTTACCGTACAGAGCTTTACAGGCCCGTTCATAATCACCGGATCCCTTGTCTTATTGGCTTTGCTAGTCTCTGAAAGCCACATTTGGAAAAGGCCAGTTATGCTGGCCAAAACTTTCAGTAAAAAGTATCTATTCTACAAAAGTGATAAAAAGGCTAATCCATCTGAGGATGGTCCTGCAATTGGAGGGGATGCTGGCTCAACCAATCAAGGAAATAACTATTG 1463 0.3759 MTKSYCCVFLFSSLSFLVTLFGVGATPILLGGKTLKIGIPIKTDFKEFVDVKLNSTNQAIQNQVSGYSIDVFFAVISYLERHLALNVSYEFEAFVNTEGNIAGTYNDLLHQIPEKYDAVVGDVTIVANRSTYVDFTLPYFESGVKMLIQVRHRRHLDMWNFLQPFNWDLWLSIFAFCVFIGLVLLFMERNANKEAGMNDSPSRKQPSTRSSILWLPVARTVLPEKSVAKKCSRFVLLVWLGLAFVLMQSYTANLSTILTVDQLKPYYLTIESLIRDRANVGYRHGSFIGDLLRDHLHFDESTLKNYSKMENYRNALSKGTQNGVIAAMFDELPYIKVFLKRYGSKYMMAGPTYPNHGFGFAFPLGSNLTSYFSRAILNVTESPTMNRIEEKYFGDNHDDLQDQFNQISSETPSLTVQSFTGPFIITGSLVLLALLVSESHIWKRPVMLAKTFSKKYLFYKSDKKANPSEDGPAIGGDAGSTNQGNNY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00697 487 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 4 458 - -
Bva02g00697 487 Pfam Ligand-gated ion channel 395 427 IPR001320 GO:0015276|GO:0016020
Bva02g00697 487 Pfam Bacterial extracellular solute-binding proteins, family 3 61 394 IPR001638 -
Bva02g00697 487 MobiDBLite consensus disorder prediction 466 487 - -
Bva02g00697 487 Gene3D - 29 158 - -
Bva02g00697 487 SUPERFAMILY Periplasmic binding protein-like II 9 396 - -
Bva02g00697 487 Gene3D - 340 399 - -
Bva02g00697 487 Gene3D - 159 287 - -
Bva02g00697 487 SMART GluR_14 34 395 IPR001320 GO:0015276|GO:0016020
Bva02g00697 487 CDD GluR_Plant 33 393 - -
Bva02g00697 487 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 4 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00697 Bva-Chr2 10167438 10170283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00697 32 436 Ion Channels AT2G29120 39.853 2.06e-75 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00697 K05387 - aip:107641909 438.343