Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00696 ATGACAAAGTCATACTCTTGCGTTTTCCTCTTCCTTTTACTTTCCTTCTTAGCTGCCCATTTTGGGGTTGAGGCTACTCCTTTCTTAGGAGGAAAGACGTTGAAAATTGGGATACCCATTAAAAAGGATTTTAAGGAGTTTGTGGATGTTAAACTGAATGATACAAACCAGGCCATACAGGACAAGGTTAAAGGGTACTCAATTGACGTTTTCTTTGCTGCAGTATCTTATCTGGAAGGGAAGTACTCAGGCTTAAAGGTTTCTTATGAGTTTGAAGCTTTTGTAAACCCAGAGGGGACGTTTAATGGCACTTACGAAGAACTTCTGCAACGAATCCCAGCTGGAGAGtaTGATGCTGTGGTGGGTGATGTGACTATTGTGGAGAACCGGTCAACCTATGTAGATTTTACGTTGCCATATGCAGAATCAAGCGTGAGGATGCTTATACAAGTTAGACATAATCGCCACTTAGATATGTGGATCTTTCTAAGGCCATTTAGTTGGGATCTTTGGCTCTCCATCATCTTATTTTGTGTCTTTATAGGATTTACACTATTGTTCATGGAACGTAATGCGAACAAAGATACAAGAACTGAAGAAACACtaggtgaaaaaaaatttactggACCATCAATTTTATGGCTTCCTATTGCTCAAGCAGTGATGCCTGAAAGTGAATCTGTTGCCAAGAAATGCTCTAGGTTTGTACTTCTAGTGTGGCTAGCATTAGCATTCATTGTCGTGCAAAGCTACACAGCGAATTTATCCTCAATCTTGACATTAGATCAAATGAAGCCAAGTTACCCTACCATCGATAGTCTAATAAGAGACCAAGAAAATGTTGGATACCGACATGGTTCTTTCAtagaaaatttgttaatagATGGCTTACACTTTGATAAATTGAGGCTTAAAAATTTCTCCAAGATGGAAGATTATCGTGAGGCCTTAAGAAAAGGAACTTG 965 0.3803 MTKSYSCVFLFLLLSFLAAHFGVEATPFLGGKTLKIGIPIKKDFKEFVDVKLNDTNQAIQDKVKGYSIDVFFAAVSYLEGKYSGLKVSYEFEAFVNPEGTFNGTYEELLQRIPAGEYDAVVGDVTIVENRSTYVDFTLPYAESSVRMLIQVRHNRHLDMWIFLRPFSWDLWLSIILFCVFIGFTLLFMERNANKDTRTEETLGEKKFTGPSILWLPIAQAVMPESESVAKKCSRFVLLVWLALAFIVVQSYTANLSSILTLDQMKPSYPTIDSLIRDQENVGYRHGSFIENLLIDGLHFDKLRLKNFSKMEDYREALRKGT 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00696 321 PRINTS NMDA receptor signature 170 195 IPR001508 GO:0005216|GO:0006811|GO:0016020|GO:0038023
Bva02g00696 321 PRINTS NMDA receptor signature 235 262 IPR001508 GO:0005216|GO:0006811|GO:0016020|GO:0038023
Bva02g00696 321 Pfam Bacterial extracellular solute-binding proteins, family 3 93 320 IPR001638 -
Bva02g00696 321 Gene3D - 28 159 - -
Bva02g00696 321 Pfam Ligand-gated ion channel 167 278 IPR001320 GO:0015276|GO:0016020
Bva02g00696 321 SUPERFAMILY Periplasmic binding protein-like II 6 320 - -
Bva02g00696 321 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 320 - -
Bva02g00696 321 SMART GluR_14 33 266 IPR001320 GO:0015276|GO:0016020
Bva02g00696 321 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 3 320 - -
Bva02g00696 321 Gene3D - 160 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00696 Bva-Chr2 10111031 10112694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00696 30 321 Ion Channels AT2G29120 38.699 2.10e-57 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00696 K05387 - aip:107641909 311.997