Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00695 ATGACAAAGTCATACTCTTGCGttttcctcttcctttttctttccttcttagCTGCCCATTTTGGGGTTAGGGCTACTCCTTTCTTAGGAGGAAAGACGTTGAAAATTGGGATACCCATTAAAAAGGATTTTAAGGAGTTTGTGGATGTTAAACTGAATGATACAAACCAGGCCATACAGGACAAGGTTAAAGGGTACTCAATTGACGTTTTCTTTGCTGCAGTATCTTATCTGGAAGGGAAGTACTCAGGCTTAAAGGTTTCTTATGAGTTTGAAGCTTTTGTAAACCCAGAGGGGACGTTTAATGGCACTTACGAAGAACTTCTGCAACGAATCCCAGCTGGAGAGtaTGATGCTGTGGTGGGTGATGTGACTATTGTGGAGAGCCGGTCAACCTATGTAGATTTTACGTTGCCATATGCAGAATCAAGCGTGAGGATGCTTATACAAGTTAGACATAATCGCCACTTAGATATGTGGATCTTTCTAAGGCCATTTAGTTGGGATCTTTGGCTCTCCATCATCTTATTTTGTGTCTTTATAGGATTTACACTATTGTTCATGGAACGTAATGCGAACAAAGATACAAGAACTGAAGAAACACtaggtgaaaaaaaatttactggACCATCAATTTTATGGCTTCCTATTGCTCAAGCAGTGATGCCTGAAAGTGAATCTGTTGCCAAGAAATGCTCTAGGTTTGTACTTCTAGTGTGGCTAGCATTAGCATTCATTGTCGTGCAAAGCTACACAGCGAATTTATCCTCAATCTTGACATTAGATCAAATGAAGCCAAGTTACCCTACCATCGATAGTCTAATAAGAGACAAAGAAAATGTTGGATACCGACATGGTTCTTTCAtagaaaatttgttaatagATGGCTTACGCTTTGATAAATTGAGGCTTAAAAATTTCTCCAAGATGGAAGATTATCGTGAGGCCTTAAGAAAAGGAACTCGAAATGGAGGCATTGCTGCCATGTTTGATGAATTGCCCTACATTAAAGTCTTCCTCAAAAGGTATGGTTCCAAGTACATGATGGCTGGACAGACCTATCCCAACagtggttttggttttGCATTCCCACTAGGTTCCAATCTTACGTCAAACTTCTCAAGGGCCATATTGCATCTTATTGAAAGTTTAGAGATGTataagattgaaaaaaaatattttggtgtCAATCATGATGATCTCCAAGATCAGTACGACCAAATATCATCAGAAACTTCCAGCCTCACCACACAAAGCTTTGGAGGCCTGTTCATAATCACAGGATCCCTTATCATATCAGCTTTGCTAGTCTCTGAAAGCTATATTTGGCAAAGGCCAGTTATGGTGGCCAAAACTTTCagcaaaaaatatctattctcAAGTTCTAGAAAAGTGAATCCATCAATGGATGGTTCTACAAATGAAAGGGATGCTGGCTCAaccaatgaagaaaataaccaTCCAGAAAGTCTTCCAAGATCTCCCTCATTATCTGTGGCTGTGTA 1505 0.3661 MTKSYSCVFLFLFLSFLAAHFGVRATPFLGGKTLKIGIPIKKDFKEFVDVKLNDTNQAIQDKVKGYSIDVFFAAVSYLEGKYSGLKVSYEFEAFVNPEGTFNGTYEELLQRIPAGEYDAVVGDVTIVESRSTYVDFTLPYAESSVRMLIQVRHNRHLDMWIFLRPFSWDLWLSIILFCVFIGFTLLFMERNANKDTRTEETLGEKKFTGPSILWLPIAQAVMPESESVAKKCSRFVLLVWLALAFIVVQSYTANLSSILTLDQMKPSYPTIDSLIRDKENVGYRHGSFIENLLIDGLRFDKLRLKNFSKMEDYREALRKGTRNGGIAAMFDELPYIKVFLKRYGSKYMMAGQTYPNSGFGFAFPLGSNLTSNFSRAILHLIESLEMYKIEKKYFGVNHDDLQDQYDQISSETSSLTTQSFGGLFIITGSLIISALLVSESYIWQRPVMVAKTFSKKYLFSSSRKVNPSMDGSTNERDAGSTNEENNHPESLPRSPSLSVAV 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00695 501 CDD GluR_Plant 32 394 - -
Bva02g00695 501 Gene3D - 310 359 - -
Bva02g00695 501 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 4 466 - -
Bva02g00695 501 SMART GluR_14 33 396 IPR001320 GO:0015276|GO:0016020
Bva02g00695 501 Pfam Ligand-gated ion channel 396 428 IPR001320 GO:0015276|GO:0016020
Bva02g00695 501 Gene3D - 160 290 - -
Bva02g00695 501 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 4 466 - -
Bva02g00695 501 Gene3D - 28 159 - -
Bva02g00695 501 MobiDBLite consensus disorder prediction 463 501 - -
Bva02g00695 501 SUPERFAMILY Periplasmic binding protein-like II 7 396 - -
Bva02g00695 501 Pfam Bacterial extracellular solute-binding proteins, family 3 93 395 IPR001638 -
Bva02g00695 501 Gene3D - 360 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00695 Bva-Chr2 10090705 10093110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00695 31 495 Ion Channels AT2G29120 36.232 6.34e-78 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00695 K05387 - aip:107641909 465.692