Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00680 ATGGCAACCCCTGAAGCAAACCCAGTTCCGTTTCCATACTTCATCCAAATGGCTAATGATGTTACCATTCACATGCAATGCCTTGCAGACATTGTAGGACAGTTCAGGTGGCGTAAAGTGACAGCAATCTACGAACAAAACGACGGTTTTACCTCTAATTCCAATATATTGACTTACCTGTCCAATAATCTCAGGGATGTTAATTCTGAGATTGATGAACATGTTGCATTCCCTTCGTTAGCTTCTCTTTCAGACCCAAAAGCCACCATAGAACAAAAGCTCAAGAGGCTGCAGAAGAAGAGCAAGAGGGTTTTTCTGATAGTACAATCATCTTTGGAATTTGCTGTTATGCTTTTTGAGAAGGCAAACCAAATGGGAATGATTGAAAAAGGCTCAGCATGGATCATCTCGGACAGCGTAGCCAGTCATCTTGATTCTTTGGATCCCTCGGTTACCGATAACATGCAGGGGGTTCCACTTAATGGAGCCTGTCCTCATCTGGTGCATGTAAGCTACGCTCAGAACAAAACCAAGGTCACAGGTTTCTCTGCTGATGTCTTTAGAAAAAGCTTGAGGCACTTGCCTTATGATTTGAGTTATGATTTTGTTCCCTTCAATGGCACATACAATGAAATAGTAAAGCAAGTCAACAACAAGGTTATCTTCTCTACTAATCGCATGCATGAATACGCTGTGCTAAATATAGGACATGGCTTTGCTGCTGTCCATGATCGTCAACAAGGTTATTTTGCCATGGGCGACCTTAATGCTGCAATCGGAGATATAGAAATAATGTCAAATCGATATCAATATGTGCAATTTGCCCACCAGTATGTGGATTCTGGCCTTACAACCATAGTCAGAGTAAAACCAGATAGATCCAAGCAAACATGGATGTTCATGGATgcttttacaaaagaaatgggGCTGTTATTGGCAACAATGCACCTATACGTTGGACTTGTTATCTGGATCATTGAACGCGGTGATAATTCAGAGTTAAAGGGATTTGGGGCAATGCTCTGGTTCTCTGTCACcatcttattttttacacaaaGGGAACCCGTGAGAAGCAACTTGGCTCGATTTGTTCTTGTACCTTGGTTGGTTATCATTTTGATCGTAACAAGAAGTTTTACAGCAAGCCTGATATCTATGATGACAGTCTCCCATCTCGAACCATCTGTGCCCGTCCTGCAGACACTTAAGAGGACAAATGCAATTGTAGGCTGCAATAGGAGGTCCTTCATGTGTGATTATTTGACTAATGAACAGGGATTTAAGCCTGAGAACATCAAGAGATTTGACTCCCTTGATGAATACCCAAGGTcattagagaaaaatgaaatcaaagcAGCTATTTTAATTGCACCACAGGCTGAAATCTTCCTTGCTACCTATTGTAAGGGCTACATCACAGCAGGAACCCCATTGACGCTTGGTGGTCTGGGCTTTGTTTTCCCTAGAGGTTCAAGATTGGCAGTAGACATGTCAGAAGCTGCACTGGAATCAATAGAAAGAGGAGAAGTGCAggatttgaagaagaaaatgctaTCCACCACAAATTGCAGGCCATCTGATGATGCGGAACAAGATGAAAAACTAGGTCCCCAACCTTCCTTTGGCCTATTCTACATTTCTGGCACCATAGCAAGCTTGGGTTTACTATTCACTATGGTGCATTTTGCTGGAAGAAATGTTAAAACATCGAAGACATGGCAACGAATCAGAAGCATGAAACTTTCTCTTATCCCTGAAAGAAATAGACAAGGCGAGACATTTACTAATGAGTA 1793 0.4038 MATPEANPVPFPYFIQMANDVTIHMQCLADIVGQFRWRKVTAIYEQNDGFTSNSNILTYLSNNLRDVNSEIDEHVAFPSLASLSDPKATIEQKLKRLQKKSKRVFLIVQSSLEFAVMLFEKANQMGMIEKGSAWIISDSVASHLDSLDPSVTDNMQGVPLNGACPHLVHVSYAQNKTKVTGFSADVFRKSLRHLPYDLSYDFVPFNGTYNEIVKQVNNKVIFSTNRMHEYAVLNIGHGFAAVHDRQQGYFAMGDLNAAIGDIEIMSNRYQYVQFAHQYVDSGLTTIVRVKPDRSKQTWMFMDAFTKEMGLLLATMHLYVGLVIWIIERGDNSELKGFGAMLWFSVTILFFTQREPVRSNLARFVLVPWLVIILIVTRSFTASLISMMTVSHLEPSVPVLQTLKRTNAIVGCNRRSFMCDYLTNEQGFKPENIKRFDSLDEYPRSLEKNEIKAAILIAPQAEIFLATYCKGYITAGTPLTLGGLGFVFPRGSRLAVDMSEAALESIERGEVQDLKKKMLSTTNCRPSDDAEQDEKLGPQPSFGLFYISGTIASLGLLFTMVHFAGRNVKTSKTWQRIRSMKLSLIPERNRQGETFTNE 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00680 597 SUPERFAMILY Periplasmic binding protein-like II 168 516 - -
Bva02g00680 597 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 157 581 - -
Bva02g00680 597 SUPERFAMILY Periplasmic binding protein-like I 10 158 IPR028082 -
Bva02g00680 597 PANTHER GLUTAMATE RECEPTOR 157 581 - -
Bva02g00680 597 PANTHER GLUTAMATE RECEPTOR 14 158 - -
Bva02g00680 597 Gene3D - 293 432 - -
Bva02g00680 597 SMART GluR_14 166 520 IPR001320 GO:0015276|GO:0016020
Bva02g00680 597 Pfam Bacterial extracellular solute-binding proteins, family 3 253 516 IPR001638 -
Bva02g00680 597 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 14 158 - -
Bva02g00680 597 Pfam Receptor family ligand binding region 7 158 IPR001828 -
Bva02g00680 597 Gene3D - 21 183 - -
Bva02g00680 597 Pfam Ligand-gated ion channel 517 548 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00680 Bva-Chr2 9801192 9804320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00680 175 562 Ion Channels AT2G17260 32.000 8.57e-55 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00680 - - gmx:100781045 453.751