Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00677 ATGATCATTCATTCCATTGCTGTATTTCAAGGAGAATCTGTTGCCAAGAAATGCTCTAGGTTTGTGCTTCTGGTGTGGTTAGGGTTGGCATTTGTTCTCATGCAAAGCTACACGGCAAATTTATCCTCAATCTTGACATTAAATCAACTAAAGCCAAGTCACCCCACCATAGATAGTCTAATAAGAGACAAGGAAGATGTTGGATACCGGCACGGTTCTTTTATAAGAGATTTGCTAAGAGATCACTTACACTTTGATGAATCGAGgcttaaaaattattccaaGATGGAAGATTATCGTAACGCCTTAAATAAAGGAACTTCAAAAGGAGGTATTGCTGCTATGTTTGATGAATTGCCCTACATTAAAGTCTTGCTCAAAAAGCACAGTTCCAAAAAAGCATTTGGCGTCAATTATGATGATCTCCAAGATCAGTATGACCAATTATCATCAGAAACGGCCAGCCTCACAGCACAGAGCTTTGCAGGCCTGTTTATAATCACTGGATCCCTTATCTTATTGGCTTTGCTAGTCTCTGAAAGCCATATTTGGAAAAGGCCATTTATGCTGGTCAAAATTCTCAGCCAAAAATATCTATTCTCGGCAAGTTCTAGAAAGGTCAATCCATCTGATGATGGTTCTACAAATGGAGGGGATGCTGGTGAAACTACAGAAGGGAATAACCATCTACAAAGATTTCCAAGATCTCTTTCACTGCCTGTGTA 725 0.3876 MIIHSIAVFQGESVAKKCSRFVLLVWLGLAFVLMQSYTANLSSILTLNQLKPSHPTIDSLIRDKEDVGYRHGSFIRDLLRDHLHFDESRLKNYSKMEDYRNALNKGTSKGGIAAMFDELPYIKVLLKKHSSKKAFGVNYDDLQDQYDQLSSETASLTAQSFAGLFIITGSLILLALLVSESHIWKRPFMLVKILSQKYLFSASSRKVNPSDDGSTNGGDAGETTEGNNHLQRFPRSLSLPV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00677 241 Gene3D - 1 74 - -
Bva02g00677 241 MobiDBLite consensus disorder prediction 204 234 - -
Bva02g00677 241 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 132 213 - -
Bva02g00677 241 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 10 131 - -
Bva02g00677 241 Pfam Ligand-gated ion channel 8 169 IPR001320 GO:0015276|GO:0016020
Bva02g00677 241 MobiDBLite consensus disorder prediction 204 241 - -
Bva02g00677 241 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 132 213 - -
Bva02g00677 241 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 10 131 - -
Bva02g00677 241 Coils Coil 139 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00677 Bva-Chr2 9755966 9757030 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00677 12 178 Ion Channels AT1G42540 32.367 8.41e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00677 K05387 - aip:107641909 194.512