Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00675 ATGGCAAAGTCATACTATTctgtttatcttttcttttctttttacttcttAGTTGCCCAGTTTGGGGTAGGGGCTACTCCTATACTTTTAGGAGGAAAGACGTGGATACCCATCAAAACTGACTTCACCGAGTTTGTGGATATTAAACTGAATAGTACAAACCAGGCCATACAGAACCAGGTTTCCGGGTACTCCATTGAAGTTTTCTTTGCTGCAGTATCTTATCTAGAAAGGCACTTAGCCTTAAATGTTTCTTATGAGTTTGAAGCTTTCGTAGACAGCGAGGGGAAAATGGCTGGCACCTACGAGGATCTTCTGCATCAAATTCCTGAAAAGTATGATGCTGTGGTCGGTGATGTAATCATTGTGGCAAACCAATCCACCTATGTAGATTTTACGTTGCCATATGCAGAATCAGGCGTTAAGATGCTTATACAAGTTAGACATGGTCGCCACATAGATATGTGGATCTTTCTGCAGCCATTTAGTTGGGATCTTTGGCTATCCATCATCTTGTTTTGTGTCTTTATAGGATTTGCACTATTGTTCATGGAACGTAATGCAAATAAAGAAGCTGGAATTGAAGATTCACCAAGTCGAAAACAACCTCCTGGACCATCAATTTTATTGCTTCCTATAGCTCAAGCAGTGCTTCCTGAAACAGAATCTGTTGCCAAGAAATGCTCTAGGCTTGTACTGTTGGTGTGGTTAGGGTTGGCATTCGTTCTCATGCAAAGTTACACAGCGAATTTGTCTTCTATCTTAACATTAGATCAATTAAAGCCAAGTTATCCTACCATTGATAGTCTAATAAGAGACCAAGAAAATGTTGGATACCGACATGGTTCTTTTATAAGAGATTTCTTAAGAGATCGCTTACACTTTGAGGAATCGAAGCTTAAAAATTACTCTAAAATGGAAGATTATTGTAATGCTTTAAGCAAAGGAACTCGGAAAGGAGGTATTGCAGCTATGTTTGATGAATTTCCCTATGTTAAAGTCTTCCTCAAAAGGCACGGTTCCAAGTACATGATGGTTGGACCTACTTATCGGAACGATGGCTTTGGTTTTGCATTTCCACTACGTTCTAACCTTACATTTTACTTCTCAAGAGCCATACTTAATGTACTCGAAGATCCAACAATGGAtaagattgaagaaaaatactttgGCATCAATCATGATGATCTCCAAGATCAGTATGACCAAATATCAACAGAAACTCCCAGCCTCACCACACAGAGCTTCGCAGGTCTCTTCATAATCACTGGATCCATTATCATATTAGCTTTGCTAGTATCTGAAAGCTGCATTTGGCAAAGGCCAGTTATGGTGGCAAAAACTTTGAGCGAAAAATATCTATTCTCCTCAAGTTCTAAAAAAGTGAATCCGTCAGTGGTTGGTTCTAATACTAATGGAAGGGGTGCTGGCTCAACCAATGAAGGAAATAACCATCTAGAAAGCCTTCCAAGATCTCTATCATTTCCTCTGTA 1493 0.3838 MAKSYYSVYLFFSFYFLVAQFGVGATPILLGGKTWIPIKTDFTEFVDIKLNSTNQAIQNQVSGYSIEVFFAAVSYLERHLALNVSYEFEAFVDSEGKMAGTYEDLLHQIPEKYDAVVGDVIIVANQSTYVDFTLPYAESGVKMLIQVRHGRHIDMWIFLQPFSWDLWLSIILFCVFIGFALLFMERNANKEAGIEDSPSRKQPPGPSILLLPIAQAVLPETESVAKKCSRLVLLVWLGLAFVLMQSYTANLSSILTLDQLKPSYPTIDSLIRDQENVGYRHGSFIRDFLRDRLHFEESKLKNYSKMEDYCNALSKGTRKGGIAAMFDEFPYVKVFLKRHGSKYMMVGPTYRNDGFGFAFPLRSNLTFYFSRAILNVLEDPTMDKIEEKYFGINHDDLQDQYDQISTETPSLTTQSFAGLFIITGSIIILALLVSESCIWQRPVMVAKTLSEKYLFSSSSKKVNPSVVGSNTNGRGAGSTNEGNNHLESLPRSLSFPL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00675 497 Gene3D - 156 298 - -
Bva02g00675 497 Gene3D - 33 155 - -
Bva02g00675 497 SMART GluR_14 39 392 IPR001320 GO:0015276|GO:0016020
Bva02g00675 497 Pfam Ligand-gated ion channel 392 424 IPR001320 GO:0015276|GO:0016020
Bva02g00675 497 MobiDBLite consensus disorder prediction 460 497 - -
Bva02g00675 497 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 2 456 - -
Bva02g00675 497 Pfam Bacterial extracellular solute-binding proteins, family 3 101 391 IPR001638 -
Bva02g00675 497 MobiDBLite consensus disorder prediction 460 490 - -
Bva02g00675 497 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 456 - -
Bva02g00675 497 SUPERFAMILY Periplasmic binding protein-like II 58 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00675 Bva-Chr2 9717895 9720968 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00675 36 460 Ion Channels AT2G29100 36.854 4.34e-74 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00675 K05387 - aip:107641909 469.544