Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00673 ATGACGATTGATTCTATTGCTTTATTTCTAGGAGAATCTGTTGCCAAGAAATGCTCCAGGTTTGTCCTTCTGGTGTGGTTGGGGTTGGCATTCGTTCTCATGCAAAGCTACACAGCAAATTTGTCCTCAATCTTGACATTAGATCAACTAAAGCCAAGATACCCCACCATAGATCGTCTAATAAGAGACCGAGAAAATGTTGGATATCGGCACGGTTCTTTCATAAGAGATTTGTTAAAAGATCACTTACACTTTGATGAATTGAGGCTTAAAAATTACTCCAAGATGGAAGATTATCGTAATGCTTTAAGTAAAGGAACCCAAAAGGGAGGTATTGCTGCTATGTTTGATGAATTACCCTACATTAAAGTCTTCCTTAAAAAGCATGGTTCCAAGTACACGATGGCTGGACCTACCTATCCGAACCACGGTTTCGGTTTTGCATTCCCACTAGGTTCCAACCTCACTTCTTACTTCTCAAGAGCCGTATTGAATATCACTGAAAGTCCAACAATGGATaagattgaacaaaaatacTTCGGCATAAATCATGAAGATCACCAAGATCAGTACGACCAAATATCATCAGAAACTCCCAGCCTCACAACGCAGAGCTTTGGAGGCCTGTTCATAATCGCTGGATCCCTTATCTTATTGGCTTTGCTAGTCTCTGAAAGCCATATTTGGAAAAGGCCAGTCATGCTGGCCAAAAATTTCAGCGAAAAATATCTATTCCGATCAAGTTCTAAAAAGGTCAATCCATCTGAGGATGATTCTACAAATGGAAAGGATGCTGGTGCCACCAATGAAGGGAATAACCTTGAAGAAAGACTTCCCAGATCGCTTTCATCGCCTGTGTA 860 0.4012 MTIDSIALFLGESVAKKCSRFVLLVWLGLAFVLMQSYTANLSSILTLDQLKPRYPTIDRLIRDRENVGYRHGSFIRDLLKDHLHFDELRLKNYSKMEDYRNALSKGTQKGGIAAMFDELPYIKVFLKKHGSKYTMAGPTYPNHGFGFAFPLGSNLTSYFSRAVLNITESPTMDKIEQKYFGINHEDHQDQYDQISSETPSLTTQSFGGLFIIAGSLILLALLVSESHIWKRPVMLAKNFSEKYLFRSSSKKVNPSEDDSTNGKDAGATNEGNNLEERLPRSLSSPV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00673 286 SUPERFAMILY Periplasmic binding protein-like II 35 183 - -
Bva02g00673 286 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 11 262 - -
Bva02g00673 286 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 262 - -
Bva02g00673 286 Gene3D - 71 187 - -
Bva02g00673 286 MobiDBLite consensus disorder prediction 259 286 - -
Bva02g00673 286 Gene3D - 6 70 - -
Bva02g00673 286 MobiDBLite consensus disorder prediction 247 286 - -
Bva02g00673 286 Pfam Ligand-gated ion channel 12 214 IPR001320 GO:0015276|GO:0016020
Bva02g00673 286 Pfam Bacterial extracellular solute-binding proteins, family 3 34 181 IPR001638 -
Bva02g00673 286 SMART GluR_14 2 182 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00673 Bva-Chr2 9661391 9662472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00673 19 224 Ion Channels AT5G11210 42.857 3.13e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00673 K05387 - aip:107641909 268.855