Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00651 ATGTCAAAGTCATACTGttgtgttttccttttctcttcactTGCCTTCTTAGTTACCCTGTTCGGGGCTGGTGCTACTCCTATTCTTTTAGGAGGAAAGACGTTGAAAATTGGGATACCCATTAAAACTGAATTTAAGGAGTTTGTGGATGTTAAACTGAATAGTACAAACCAGGCCATACAGAACCAGGTTAAAGGGTACTCAATTGATGTTTTCTTTGCTGCAGTATCTTATCTGGAAAGGCACTCCTTAAATGTTTCTTATGAGTTTGAAGCTTTCGTAAACAGAGAGGGGAACATTGCTGGGACTTACGACGATCTTCTGCATAAAATTCCTGAAAAGTATGATGCAGTTGTGGGCGATGTTACTATTCTCACAAATCGATCAACCTATGTAGATTTTACATTGCCATATGCAGAATCAGGAGTGAAGATGCTTATACAAGTTAGGCATAGGCGCCACTTAGATATGTGGAACTTCCTGCATCCATTTAGTTGGGATCTTTGGCTGTCCATTTTCGCATTTTGCGTCTCCATAGGATTTGTGTTAGTATTCATGGAACGTAATGCAAACAAAGAAGCTGGAATGGAAGATTCACCAAGTCGAAAACAACCTAGTACTAGATCATCAATTTTATGGCTTCCTATAGCTCAACCGGTGCTTCCTGAAAGTACTCGAAATGGAGGTATTGCTGCTATGTTTGATGAATTGCCCTACATTAAAGTCTTCCTCAAGAGGCATGGTTCCAAGTACATGATGGCTGGACCTACCTATCCGAAccatggttttggttttGCATTCCCTCTAGGTTCAAACCTTACTTCTTACTTCTCAAGAGCCATATTAAATGTCACTGAAAGTTCAACGATGGATAAGActgaagaaaaatactttgGCGACAATCATGATGATCCCCAAGATCAGTTCAACCAAATATCATCAGAAACTCCTAGCCTTACCGCACAGAGCTTTGCAGGCCCGTTCATAATCACTGGATCCCTTGTCTTATTGGCTTTGCTAGCCTCTGAAAGCCACATTTGGAAAAGACCAGTTATGCTGGCCAAAACTTTCAGCAAAAAGTATCTATTCtacaaaagttataaaaaggcCAATCCATCTGAGGATGGTCTTGCAATTGGAGGGGATGCTGGCTCAACCAATCAAGGGAATAACTATCGAAAAAGACTTCCAAGgtctctttcctttcctgcGTA 1214 0.3797 MSKSYCCVFLFSSLAFLVTLFGAGATPILLGGKTLKIGIPIKTEFKEFVDVKLNSTNQAIQNQVKGYSIDVFFAAVSYLERHSLNVSYEFEAFVNREGNIAGTYDDLLHKIPEKYDAVVGDVTILTNRSTYVDFTLPYAESGVKMLIQVRHRRHLDMWNFLHPFSWDLWLSIFAFCVSIGFVLVFMERNANKEAGMEDSPSRKQPSTRSSILWLPIAQPVLPESTRNGGIAAMFDELPYIKVFLKRHGSKYMMAGPTYPNHGFGFAFPLGSNLTSYFSRAILNVTESSTMDKTEEKYFGDNHDDPQDQFNQISSETPSLTAQSFAGPFIITGSLVLLALLASESHIWKRPVMLAKTFSKKYLFYKSYKKANPSEDGLAIGGDAGSTNQGNNYRKRLPRSLSFPA 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00651 404 Gene3D - 29 157 - -
Bva02g00651 404 SUPERFAMILY Periplasmic binding protein-like II 8 301 - -
Bva02g00651 404 Pfam Bacterial extracellular solute-binding proteins, family 3 226 299 IPR001638 -
Bva02g00651 404 Gene3D - 229 263 - -
Bva02g00651 404 Gene3D - 158 219 - -
Bva02g00651 404 MobiDBLite consensus disorder prediction 379 404 - -
Bva02g00651 404 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 226 363 - -
Bva02g00651 404 SMART GluR_14 34 300 IPR001320 GO:0015276|GO:0016020
Bva02g00651 404 Pfam Ligated ion channel L-glutamate- and glycine-binding site 55 149 IPR019594 GO:0004970|GO:0016020
Bva02g00651 404 Gene3D - 264 298 - -
Bva02g00651 404 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 4 224 - -
Bva02g00651 404 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 226 363 - -
Bva02g00651 404 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 4 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00651 Bva-Chr2 9123152 9126018 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00651 227 340 Ion Channels AT2G29120 44.737 4.90e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00651 K05387 - pvy:116124956 259.996