Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00646 ATGATCATTCACTCCATTGCCTTATTTCTAGGAGAATCTGTTGCCAAGAAATGCTCTAGGTTTGTGCTTCTGGTGTGGTTAGGGTTGGCATTCGTCCTCATGCAAAGCTACACAGCAAATTTATCCTCAATCTTGACATTAGATCAACTAAAGCCAAGTCACCCCACCATAGATAGTCTAATAAGAGACAAGGAAAATGTTGGATACCGGGACAGTTCTTTTATAAGAGATTTGTTAAGAGATCACTTACACTTTGATGAATCGTGGCTTAAAAATTACTCCAGAATGGAAGATTATACTTA 302 0.3808 MIIHSIALFLGESVAKKCSRFVLLVWLGLAFVLMQSYTANLSSILTLDQLKPSHPTIDSLIRDKENVGYRDSSFIRDLLRDHLHFDESWLKNYSRMEDYT 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00646 100 Pfam Ligand-gated ion channel 12 64 IPR001320 GO:0015276|GO:0016020
Bva02g00646 100 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 99 - -
Bva02g00646 100 Gene3D - 2 77 - -
Bva02g00646 100 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 11 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00646 Bva-Chr2 8994993 8995295 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00646 12 93 Ion Channels AT2G29120 43.902 1.06e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00646 K05387 - aip:107641909 105.916