Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00637 ATGGCAAAGTCATACTGTTCTgtttaccttttcttttctctttctttcttaggTGCCCATTTTCTTGTAAGGGCTAATCCTCAACTTTTAGGAGGAAAGACGTTGAAAATTGGGATACCCATCAAAACTGACTTTAACGAGTTTGTGGATGTTAAACTGAATAGAACAAACCAGGCCATACAGAACCAGGTTACTGGGTACTCAATTGAAGTTTTCTTTGCTGCAGTATCTTATCTGGAAGGCCATTTAGGCTTAAATGTTTCTTATGAGTTTGAAGCTTTTGTAAACAAAGAGGGGAAGATTGCTGGCACTTACGAGGATCTTCTGCATCAAATTCCTGAAAAGTATGATACTGTGGTGGGCGATGTAACTATTGTGGCAAATCGGACAACCTATGTAGATTTTACAATGCCATATGCGGAATCAGGAGTGAAGATGCTTATACAAGTTAGACATAGCCGCGACTTAGATATGTGGAACTTTCTGCAGCCATTTAGTTGGGATCTTTGGCTGTCCACCATCATATGTTGCATCTTTATAGGATTTGTGCTGTTAGTCATGGAACGTAATGCAAATAAAGAAGCTCGAATGGAAGATTCAGCAAGTCAAAAACAACCTACTGGTCTATCAATTTTATGGCTTCCTGTAGCTCATGCGGTGTTCCCTGAAACATCTGTTGCCAAGAAATGCTCTAGGTTTGTACTGTTGGTGTGGTTAGGGTTGGCATGCCTTCTCACGCAAAGCTACACAGCAAATTTGTCCTCAATCTTAACATTAGATCAACTACAGCCAAGTTATCCTACAATTCAAAGTCTAATAAGAGACCAAGAAAATGTTGGATACCGGCACGGTTCTTTCATAGGAGATTTCTTAAGGGATCGCTTACACTTTGATGAATCAAGACTTAGAAATTACTCCAAAATGGAAGATTATCGCAATGCCTTAAGCAAAGGAACTCAAAAAGGAGGTATTGCGGCTATGTTTGATGAGTTGCCCTACATTAAAGTCTTCCTCAAAAGGCATGGCTCCAAGTACATGATGGCTGGACCTACCTATCGGAACgatggttttggttttGCATTCCCACTAGGTTCCAACCTTACCCGATACTTCTCAAGGGCCATACTAAACGTACTTCAAGATCCAACAATAGAtattattgaagaaaaatactttgGCATCAATCGTGATGATCTCCAAGATCAAATATCATCAGAAACTCCCAGCCTCACCACACGGAGCTTTGCAGGCCTGTTCATAATCACTGGATCCCTTACCTTATTAGCTTTGCTAGTCTCTGAAAGCTTTATTTTGCGAGGGCCAGTTATGTTGGTCAAAACTATCAGCAAAAAATATCTAGTCTCCTCAAGTTCTAAAAAAGTGAATCCATCAGTCGATGGTTCTAATACTAATGGAAGGTACGCTGGTTCAaccaatgaagaaaataatcatCTAGAAAGACTTCCAAGATCTCGTTCATTTCATCTATA 1490 0.3812 MAKSYCSVYLFFSLSFLGAHFLVRANPQLLGGKTLKIGIPIKTDFNEFVDVKLNRTNQAIQNQVTGYSIEVFFAAVSYLEGHLGLNVSYEFEAFVNKEGKIAGTYEDLLHQIPEKYDTVVGDVTIVANRTTYVDFTMPYAESGVKMLIQVRHSRDLDMWNFLQPFSWDLWLSTIICCIFIGFVLLVMERNANKEARMEDSASQKQPTGLSILWLPVAHAVFPETSVAKKCSRFVLLVWLGLACLLTQSYTANLSSILTLDQLQPSYPTIQSLIRDQENVGYRHGSFIGDFLRDRLHFDESRLRNYSKMEDYRNALSKGTQKGGIAAMFDELPYIKVFLKRHGSKYMMAGPTYRNDGFGFAFPLGSNLTRYFSRAILNVLQDPTIDIIEEKYFGINRDDLQDQISSETPSLTTRSFAGLFIITGSLTLLALLVSESFILRGPVMLVKTISKKYLVSSSSKKVNPSVDGSNTNGRYAGSTNEENNHLERLPRSRSFHL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00637 496 MobiDBLite consensus disorder prediction 458 496 - -
Bva02g00637 496 CDD GluR_Plant 33 392 - -
Bva02g00637 496 Gene3D - 159 287 - -
Bva02g00637 496 Pfam Bacterial extracellular solute-binding proteins, family 3 62 393 IPR001638 -
Bva02g00637 496 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 1 464 - -
Bva02g00637 496 Pfam Ligand-gated ion channel 394 423 IPR001320 GO:0015276|GO:0016020
Bva02g00637 496 Gene3D - 28 158 - -
Bva02g00637 496 SMART GluR_14 34 394 IPR001320 GO:0015276|GO:0016020
Bva02g00637 496 Gene3D - 288 397 - -
Bva02g00637 496 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 464 - -
Bva02g00637 496 SUPERFAMILY Periplasmic binding protein-like II 13 394 - -
Bva02g00637 496 MobiDBLite consensus disorder prediction 458 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00637 Bva-Chr2 8832688 8835632 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00637 30 432 Ion Channels AT2G29100 40.148 6.17e-77 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00637 K05387 - aip:107641909 441.039