Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00591 ATGGGCAAAGTTTGGCTTGTCATGTTCGTGATCTTCTACTATGGTTTCCTTTCACATGGAGTCACTGATGTTTCTAATAGACCCAGTGTCGTTAACATTGGGGCACTTCTATCTTTCAATTCAACCGTAGGCAAAGTGGCAAAAGTTGCCATAGACGCTGCAGTCAAAGATATAAATTCCAATCCGACGATTCTCAATGGAACTCGGCTTAATATTTCAATGCAGGATACAAAGTTGTCAAGTGGGTTCCTAGGAATCATTGATTCATTACTATTGATGGAGAAAGACACCGTGGCCATAATAGGTCCCGAATTCTCAGTCATGGCTCATGTCATTTCACATATAGCAAATGAGTTGCAAGTACCTTTACTTTCATTTGCTGCCACTGACCCTACCTTGTCTCACCTTCAGTTCCCATACTTTGTTAGGACAACATCGAGTGATCTGTTTCAGATGGCTGCTATTGCAGATATCGTTAGCTATTACGAGTGGAGAGATGTAGTAGCAGTCTACATTGATGATGATCATGGAAGAAATGGGATAGCTGTATTAGGGGATAAGCTAGCTGAAAAACATTGTAAAATCTCATATAAAGCAACCCTTAAACCTAATATCACAATATCCAAGAATGAAGTATACGATGCGTTAGTGAAGGTAGCTTTAATGGAGTCTCGGGTTATAGTACTCCACACATACCCTGATTTTGGTCTAGAAGTGCTTCATGTGGCTAATGAACTTGGCATGGTAAATGGGTATGCGTGGATAACCACGGATTGGCTTCTTACTTTACTAGATACAGACCCGTCCAAGGCTGCTCCATACTTGAATGACATCCAAGGTGTTATCACCTTGCGCATGTACACCCCAGATAATCCAGGTAAAAGGGATTTTGTTTCTAGGTGGGGCAATCTAACTAGAGAAAAAGCTACTGATCAGGGTAGTCTTCGGTTGAACAACTATGGTCTATATGCCTATGACACTGTCAGGGTTCTTGCTTATGCACTTGatgcatttttcaaaaatgggGGAACTTTGTCGTTTTCAAATGATTCaagtttaaacaatttaaggGGAGACAACTTGCATTTGGATACAATATGGGTCTTTTCTAGTGGAAATCTTCTGCTTAAGAACATTTTAGAGGTCAATACAACAGGTTTAACAGGCCAATTGAAGTTTGATTCAGATGGGAACCTTGTGGATCCGGCATATGAACTCATTAATGTGATTGGCACTGGCGTTAGAAGAATCGGTTATTGGTCAAACGCTTCTGGATTATCAGTCACTGAACCAGGTAAAAGTAAAACCCCCATGACTCCAAAACTCTATGGTGTCATCTGGCCTGGCCAAACAACTCAAACACCTCGAGGTTGGGTATTCTCCAGCGGTAATGGAAGGCATTTGAGAATTGGTGTCCCTCTGCGAATTAGTTACAGCGAATTTGTATCAGAGGTTGCGGATACTGATACATTTGGTGGTTATTGTATAGATGTGTTTACTGCTGCACATGATTTGTTGCCATATCCTGTCCCATATAAGTTCATTCCTTTTGGTGATGGTCGAACCAACCCATTGAACTCACAACTTCTGCACATGATTACAACTGGCAAATTTGATGCTGTGGTGGGCGACATTACCATTACCACAAACAGAGCAAAAATGGTGGACTTCACACAGCCATACATTGAATCCGGACTAGTTGTTGTTGCCCCTATCAGGAAGTTGAATTCTAGTGCTTGGGCTTTCCTGAGACCATTTACTCCAATGATGTGGTTTGTGACAGGAATGTTCTTCTTAGTTGTGGGAGCAGTTGTTTGGATTTTGGAACGCAGGATAAATGATGATTTTAGAGGCCCAGCTAGAAGGCAGTTTGTCACCATTATATGGTTTAGCTTTTCaactttgttcttttctcACAGAGAGAGAACTGTGAGCACCCTTGGTCGCTTAGTACTAATTATATGGCTGTTTGTGGTTCTGATACTCAACTCAAGCTATATTGCAAGTTTGACCTCTATTCTTACGGTGGAACAGCTCTCTTCCTCAGTTAAGGGAATCGAAAGCTTGGTAACTAGCAATGATCGCATTGGTTTCCTGCGTGGTTCATTTGCTGAAAATTATCTAACTGAGGAGCTCAACATACACAAATCCAGGCTTGTTGCTCTGAACTCTCCTTCAGAGTATGAGAAAGCCTTAAAGGATGGGCCTGGTAATGGTGGTGTTGCAGCAATAATAGATGAACGTGCATACATGGAGCTCTTCCTAGCAACCAGATGTGAATTTGGTATTGTGGGTCAAGAGTTCACCAAAATGGGATGGGGCTTTGCTTTCCCAAGGGACTCTCCCCTAGCCATTGACATGTCAACTGCCATACTCACATTATCAGAGAATGGGGGTCTGCAGAGAATCCATGACAAATGGCTTACGAGAAGTGCTTGCAGTGCAGAAGGTGAAAAGCAAGGCGTAGACAGACTCGAGATTAAGAGCTTCTGGGGTCTGTTTCTTCTGAGTGGCATAGCATGCGTTGTTGCTCtcctttgttattttattcggATGGCCTACTGTTTCAGCAGGCGCTCCAATGGTAACCTTGATAGCTCTTCACGCTCAGCTTGGCTTCGctcatttctttcctttgtcaatgaaaaagaaaaggaagacaaGAACAgagcaaagaaaatgagaaaggaaaagggcAGAAGCAGAAGAGTGGTGCATGAAGATGGGTCAAATACTAGGGTCCACAATGAAATGGCCATGCCTAACTA 2768 0.4064 MGKVWLVMFVIFYYGFLSHGVTDVSNRPSVVNIGALLSFNSTVGKVAKVAIDAAVKDINSNPTILNGTRLNISMQDTKLSSGFLGIIDSLLLMEKDTVAIIGPEFSVMAHVISHIANELQVPLLSFAATDPTLSHLQFPYFVRTTSSDLFQMAAIADIVSYYEWRDVVAVYIDDDHGRNGIAVLGDKLAEKHCKISYKATLKPNITISKNEVYDALVKVALMESRVIVLHTYPDFGLEVLHVANELGMVNGYAWITTDWLLTLLDTDPSKAAPYLNDIQGVITLRMYTPDNPGKRDFVSRWGNLTREKATDQGSLRLNNYGLYAYDTVRVLAYALDAFFKNGGTLSFSNDSSLNNLRGDNLHLDTIWVFSSGNLLLKNILEVNTTGLTGQLKFDSDGNLVDPAYELINVIGTGVRRIGYWSNASGLSVTEPGKSKTPMTPKLYGVIWPGQTTQTPRGWVFSSGNGRHLRIGVPLRISYSEFVSEVADTDTFGGYCIDVFTAAHDLLPYPVPYKFIPFGDGRTNPLNSQLLHMITTGKFDAVVGDITITTNRAKMVDFTQPYIESGLVVVAPIRKLNSSAWAFLRPFTPMMWFVTGMFFLVVGAVVWILERRINDDFRGPARRQFVTIIWFSFSTLFFSHRERTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSSVKGIESLVTSNDRIGFLRGSFAENYLTEELNIHKSRLVALNSPSEYEKALKDGPGNGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILTLSENGGLQRIHDKWLTRSACSAEGEKQGVDRLEIKSFWGLFLLSGIACVVALLCYFIRMAYCFSRRSNGNLDSSSRSAWLRSFLSFVNEKEKEDKNRAKKMRKEKGRSRRVVHEDGSNTRVHNEMAMPN 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00591 922 SMART GluR_14 469 810 IPR001320 GO:0015276|GO:0016020
Bva02g00591 922 Gene3D - 756 815 - -
Bva02g00591 922 MobiDBLite consensus disorder prediction 884 922 - -
Bva02g00591 922 SUPERFAMILY Periplasmic binding protein-like II 444 810 - -
Bva02g00591 922 Pfam Receptor family ligand binding region 49 411 IPR001828 -
Bva02g00591 922 Gene3D - 147 426 - -
Bva02g00591 922 CDD GluR_Plant 468 808 - -
Bva02g00591 922 Pfam Bacterial extracellular solute-binding proteins, family 3 488 809 IPR001638 -
Bva02g00591 922 CDD PBP1_GABAb_receptor_plant 32 428 IPR044440 -
Bva02g00591 922 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 16 912 - -
Bva02g00591 922 SUPERFAMILY Periplasmic binding protein-like I 27 458 IPR028082 -
Bva02g00591 922 PANTHER GLUTAMATE RECEPTOR 16 912 - -
Bva02g00591 922 Pfam Ligand-gated ion channel 810 841 IPR001320 GO:0015276|GO:0016020
Bva02g00591 922 Gene3D - 464 578 - -
Bva02g00591 922 Gene3D - 579 710 - -
Bva02g00591 922 PIRSF IGluLR_plant 1 922 IPR017103 -
Bva02g00591 922 Gene3D - 49 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00591 Bva-Chr2 7724187 7735655 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00591 1 895 Ion Channels AT1G42540 58.952 0.0 1069
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00591 K05387 - gmx:100790502 1372.84