Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00589 ATGACTGGTGTAACGGGTCAAGTCAAGTATACATCTGACGGGAACCTTGTTAATCCAGCGTTTGAAGTCCTTAATGTGATGGGGACAGTAGTTCGGAGGATCAATGGTAACAGCAACCCTAGTAACACTGAGCTTGTCCGTCTGATCACAGCGGGAGTCTTTGATGCGGCAGTAGGTGACATTACAATTACTACAGAGAGAACAAGGATGGTTGATTTTACTCAACCATTCATTTA 236 0.4407 MTGVTGQVKYTSDGNLVNPAFEVLNVMGTVVRRINGNSNPSNTELVRLITAGVFDAAVGDITITTERTRMVDFTQPFI 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00589 78 SUPERFAMILY Periplasmic binding protein-like II 36 77 - -
Bva02g00589 78 Pfam Ligated ion channel L-glutamate- and glycine-binding site 36 77 IPR019594 GO:0004970|GO:0016020
Bva02g00589 78 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 78 - -
Bva02g00589 78 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 34 - -
Bva02g00589 78 Gene3D - 6 78 - -
Bva02g00589 78 PANTHER GLUTAMATE RECEPTOR 35 78 - -
Bva02g00589 78 PANTHER GLUTAMATE RECEPTOR 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00589 Bva-Chr2 7719888 7720526 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00589 35 78 Ion Channels AT3G51480 75.000 1.63e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00589 K05387 - gmx:100788917 83.9593