Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00587 ATGATGGGAGTTTGGTTTGTGGTATTAATGGTTCTCTCCAATGGGTTCTTTCCAACTTGGGCTGACATGAATAATTCCACTGTACCTGATTCTGTAAATATTGGGGTTCTCTACTCTTTCAATACTACTAttggtataattttaaaaatcgcTATAGAAGCTGCAGTTGAAGATGTAAATTCTGATTCATCAATTATTGGTAAAACTCAGTTAAAAGTCTTAATGCAAGAGGATTCCAAGTACAAAGGTTTTCTGAGCATTGTTGAAGAATTTGTTGAATTCTATGGGTGGAGAAAGGTTATTACAGTTTATGTTGATGACCACTACGGGAGAAATGGCATCTCTGCGTTAGGGGATAAGCTTGCTGAGAGACGTTGTAAGATCTCATTTAAAGCACCAATGACCGCTGAAGCAACTAAGGAGGACATTACTGATATAGCCACTAGTTTCCTTTCTACTCTACTGTATACTGCCAGGTCCCTCCCTTCAGATGAAAAGCAGGACATTCAAGGAGTTGTTACACTACGTATGTACACACCAGAGACAGAGCTGAAAAGGAGATTTGTTTCTAGGTGGCATAACTTGACAAGAGGAAGCACTGCCAATGGCCCCATGGGACTGACTACTTATTGTTTCTATGCATACGATACTGTTTGGTTACTTGCTCGTGTAATTGACACATTTTTCAAAGAAGGAAATCGAATTACCTTTTCaaatgattcaaatttatttgatctACGTGAAGGCAGCTTACATCTTGATGCTTTGACCATTTTCAATGAAGGGAATAAATTGGATAGTAGTATTTTAGGTATTAACATGACTGGTGTAACAGGTCAAGTCAAGTATACATCTGATGGGAACCTTGTTAATCCAGCATATGAAGCCCTCAATGTGATAGGGACAGGAACTCAAAGGATTGGTTATTGGTCTAATCATTCTGGATCATCAATTATTCCTCCTGAATCATTCAAAACCAGCCAATCATTCTTTTGCTA 998 0.3717 MMGVWFVVLMVLSNGFFPTWADMNNSTVPDSVNIGVLYSFNTTIGIILKIAIEAAVEDVNSDSSIIGKTQLKVLMQEDSKYKGFLSIVEEFVEFYGWRKVITVYVDDHYGRNGISALGDKLAERRCKISFKAPMTAEATKEDITDIATSFLSTLLYTARSLPSDEKQDIQGVVTLRMYTPETELKRRFVSRWHNLTRGSTANGPMGLTTYCFYAYDTVWLLARVIDTFFKEGNRITFSNDSNLFDLREGSLHLDALTIFNEGNKLDSSILGINMTGVTGQVKYTSDGNLVNPAYEALNVIGTGTQRIGYWSNHSGSSIIPPESFKTSQSFFC 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00587 332 PANTHER GLUTAMATE RECEPTOR 3.6 21 87 - -
Bva02g00587 332 Gene3D - 85 151 - -
Bva02g00587 332 PANTHER GLUTAMATE RECEPTOR 3.6 146 326 - -
Bva02g00587 332 PANTHER GLUTAMATE RECEPTOR 3.6 87 146 - -
Bva02g00587 332 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 21 87 - -
Bva02g00587 332 SUPERFAMILY Periplasmic binding protein-like I 27 322 IPR028082 -
Bva02g00587 332 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 87 146 - -
Bva02g00587 332 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 146 326 - -
Bva02g00587 332 Gene3D - 171 311 - -
Bva02g00587 332 Pfam Receptor family ligand binding region 91 145 IPR001828 -
Bva02g00587 332 Pfam Receptor family ligand binding region 165 300 IPR001828 -
Bva02g00587 332 Gene3D - 181 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00587 Bva-Chr2 7693935 7695373 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00587 5 93 Ion Channels AT3G51480 40.659 4.00e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00587 K05387 - rcu:8281328 301.212